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SCNpilot_expt_500_bf_scaffold_6508_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 1..408

Top 3 Functional Annotations

Value Algorithm Source
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5X2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 135.0
  • Bit_score: 264
  • Evalue 8.40e-68
isopropylmalate/homocitrate/citramalate synthase similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 135.0
  • Bit_score: 260
  • Evalue 3.80e-67
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 136.0
  • Bit_score: 266
  • Evalue 1.80e-68

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGCACGAGCTGGGCTGCCACGAAATCTCGCTGGGCGACACCATCGGCGTCGGCACGCCGGCGAAGGCGCGCGCGATGCTGCACGCGGTGGCGCAGGAAGTGCCGATCGCCGCGCTGGCCGTGCATTTCCACGACACCTACGGCCAGGCGCTGGCGAACATCCTGGCCTGCCTGGAGGAAGGCGTGCGCGTGATCGACAGCGCGGTCTCGGGCACCGGCGGCTGCCCGTACGCGAAGGGCGCCACCGGCAACGTGGCCAGCGAAGACGTGGTCTACATGCTGCACGGCATGGGCATGGAAACCGGCATCGACCTCGACCTGCTGGTCGCCACCGGCGCCTGGCTGGCCGCGCAACTGCACAAGGAAACCGCCAGCCGGGTCACCCGGGCACGCACCGCCGCGGCCTGA
PROTEIN sequence
Length: 136
MHELGCHEISLGDTIGVGTPAKARAMLHAVAQEVPIAALAVHFHDTYGQALANILACLEEGVRVIDSAVSGTGGCPYAKGATGNVASEDVVYMLHGMGMETGIDLDLLVATGAWLAAQLHKETASRVTRARTAAA*