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SCNpilot_expt_500_bf_scaffold_7863_9

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 11216..11479

Top 3 Functional Annotations

Value Algorithm Source
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 85.0
  • Bit_score: 156
  • Evalue 1.30e-35
fumarase (EC:4.2.1.2) similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 85.0
  • Bit_score: 155
  • Evalue 1.10e-35
Fumarate hydratase class II n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4W9P0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 85.0
  • Bit_score: 156
  • Evalue 9.30e-36

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
GTGCTGCTGGCGGACAAGTCCATCGCCGGCTTCAAGGTCAACAAGGCGCGGGTGAACCAGGCGCTGGCGATGAACCCGATCCTGGTCACCGCGCTGAATCCGGTGATCGGCTACGAGAAGGGCGCGGCCACCGCCAAGCAGGCGTACAAACAGCACCGGCCGATCATGGACGTGGCGCTGGAAACCACCGGGCTGAAAAAGGACGAGTTGAAGAAGCTGCTCGACCCGATGGCGCTGACCCGCGGCGGCATCCACGAAAAATAG
PROTEIN sequence
Length: 88
VLLADKSIAGFKVNKARVNQALAMNPILVTALNPVIGYEKGAATAKQAYKQHRPIMDVALETTGLKKDELKKLLDPMALTRGGIHEK*