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SCNpilot_expt_500_bf_scaffold_6951_5

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 6590..7744

Top 3 Functional Annotations

Value Algorithm Source
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 330.0
  • Bit_score: 597
  • Evalue 1.70e-167
uroporphyrinogen decarboxylase (EC:4.1.1.37) similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 350.0
  • Bit_score: 592
  • Evalue 7.00e-167
Uroporphyrinogen decarboxylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJK0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 330.0
  • Bit_score: 597
  • Evalue 1.20e-167

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1155
ATGCCCGATGCCCTGAACAACGACCGCTTCCTGCGCGCGCTGCGCCGCGAGCCCACCGACACCACGCCGACCTGGGTGATGCGCCAGGCGGGCCGCTACCTGCCCGAGTACCGCGCCACCCGCGAGCGCGCCGGCAGCTTCATGGGCCTGGCGCAGAACCCGGAATACGCCTGCGAAGTGACCCTGCAACCGCTGCGGCGTTTCGACCTCGACGCGGCGATCCTGTTTTCCGACATCCTCACCATTCCCGACGCGATGGGCCTCGGCCTCTCGTTTGCGCACGGCGAAGGCCCGCAGTTCGCGCGCCCCGTCCGCACCGCGGCGGACATCACCCGGCTCGCCGTGCCGGACATGGATGGCGAACTGCGCTACGTGATGGACGCGGTGCGGCTGATCCGCCGCGAACTGCACGGCCGCGTGCCGTTGATCGGTTTTTCCGGCAGCCCGTGGACGCTGGCCTGCTACATGGTCGAGGGCCACGGCTCGCGCGATTTCGCCACGCTCAAGACGCTGTGCTGGAACGAGCCGAAACTCGCCCACCAGCTGCTCGACACGCTGGCCCAGGCGGTGACCGCCTACCTGCTCGCCCAGGCCACGGCCGGCGCGCAGGCGCTGATGATCTTCGACACCTGGGGCGGCCTGCTCGGCCCGGCGCCGTTCCGCGAGTTCTCGCTGCGCTACATGGCGCGGATCGTGGCCGCGCTGAAAGAGCACGCCGCTTCGCGCGAACTGCCGGTGATCCTGTTCTCCAAGGGCGCCCATGGCCAGTTGGCGGCGCTGGCCGACAGCGGCTGCGCGGCGCTTGGCGTGGACTGGACGGTCGACCTGGCCGACGCGCGTGCCGCCGTGGCGGGCCGCGTGGCGCTGCAAGGCAACCTCGATCCGGCGATCCTGCGCGCCAGCCCGGCGGTGATCCGCCGCGAGGCCCGCGCGGTGATGGACAGCTACGGCAACCACCCCGGCCACGTGTTCAACCTCGGTGCTGGTGGACGAGGTGCACGCCTACGGGCGCACGCTGCGCGCCTGATCGAGGACCGGCGCGCGCGCGGCACTCAAGATCGGCGACGCGACGCCGATACCCCAGTGGCATGGACCCCGATGCGAGCAGCCAGGCCGCGGCCTGCGGCAGGCCGAATGCCTCGCGGCCCGGCATGA
PROTEIN sequence
Length: 385
MPDALNNDRFLRALRREPTDTTPTWVMRQAGRYLPEYRATRERAGSFMGLAQNPEYACEVTLQPLRRFDLDAAILFSDILTIPDAMGLGLSFAHGEGPQFARPVRTAADITRLAVPDMDGELRYVMDAVRLIRRELHGRVPLIGFSGSPWTLACYMVEGHGSRDFATLKTLCWNEPKLAHQLLDTLAQAVTAYLLAQATAGAQALMIFDTWGGLLGPAPFREFSLRYMARIVAALKEHAASRELPVILFSKGAHGQLAALADSGCAALGVDWTVDLADARAAVAGRVALQGNLDPAILRASPAVIRREARAVMDSYGNHPGHVFNLGAGGRGARLRAHAARLIEDRRARGTQDRRRDADTPVAWTPMRAARPRPAAGRMPRGPA*