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SCNpilot_expt_500_bf_scaffold_11887_8

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(5894..6175)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase C n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W475_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 91.0
  • Bit_score: 154
  • Evalue 4.90e-35
Ribosomal RNA small subunit methyltransferase C {ECO:0000313|EMBL:EIL94266.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 91.0
  • Bit_score: 154
  • Evalue 6.90e-35
16S RNA G1207 methylase RsmC similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 93.0
  • Bit_score: 151
  • Evalue 1.30e-34

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
GTGAACGTGCACTGGCACGACGTGACCCGCGGCTTGCCCGAACGCTACGATGCCATCGTCAGCAATCCGCCATTCCACCAGGGCCGCGCGGACCTGCCGGAGCTGGGCCGCGCCTTCATCACCAGTGCAGCGGATGCGCTGCGACCGGACGGCTGCCTGCTGCTGGTGGCGAATCGGCACCTGCCGTACGAGGCGCACCTGGGCCAGCGATTCGAGACGGTGCGCACGCTGGCGACGCAGGAAGGATTCAAGGTGATCGAGGCCACCGGAGTACGCGCATGA
PROTEIN sequence
Length: 94
VNVHWHDVTRGLPERYDAIVSNPPFHQGRADLPELGRAFITSAADALRPDGCLLLVANRHLPYEAHLGQRFETVRTLATQEGFKVIEATGVRA*