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SCNpilot_expt_500_bf_scaffold_17607_6

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(6777..7676)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 299.0
  • Bit_score: 522
  • Evalue 1.20e-145
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NBA3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 299.0
  • Bit_score: 522
  • Evalue 3.80e-145
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 300.0
  • Bit_score: 530
  • Evalue 1.90e-147

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGTTCCCCGCCTATTCGCGTTCGCGGCTCAGCGGCTGGATCAAGGCCGGCGCGGCGACCCTGGATGGCGCCCCGGCTGCGCCGCGGCAACTGCTGCGCGGCGGCGAGCGGGTCGAGCTGGATGTCGAACTGGAAACGGAAGTGCACAGCCAGCCCGAGGCGATTGCGCTGACGATCGTGTACGAGGATGCCGACCTGCTGGTGCTGGACAAGCCCGCCGGACTGGTGGTGCATCCCGGCGCCGGCAACCCGGCCGGCACGCTGCTCAACGGCTTGCTGCACCACGACCCGCAGCTGGCCGAGCTGCCGCGCGCCGGCATCGTGCATCGGCTGGACAAGGACACCTCCGGCCTGATGGTGGTGGCCAGGACGCTGTCCACCCATACCGCGCTGGTCGATCTGCTCTCGCGGCACGAAGTGGAACGCCAGTACGAAGCCGTGGTGATGGGCACGATGGTGGCCGGCGGCACGGTGGACCAGCCGATCGGCCGCAGCATGGGCGACCGCCTGCGCCAGGCCGTGCGTGACGAGGAGGACGGCAAGCGCGCGGTGACCCATTACCGCGTGCGCGAGCGCTTCCGCGCGCACAGCCTGCTGCAATGCCAGCTGGAAACCGGCCGCACCCACCAGATCCGCGTGCACCTGGCGCACATCGGCCACCCGCTGATCGGCGACCCGTTGTACGGCGGCGGCCTCAAGTTGCCCAAGGGCGCCAGTGACGGCCTGGTCGCCGCCTTGCGCGGCTTCCGCCGGCAGGCGCTGCACGCGGAGAAACTCTCGTTCGTGCATCCGGTCACCGGCGAGGCGCTGTCGTTCACGGCCGAGCGCCCCGCCGATCAATTGGCCCTGATCGAGGCGCTGCGTGCGGATCTGGCCGAACACGGTCCGGACCCGTATTGA
PROTEIN sequence
Length: 300
MFPAYSRSRLSGWIKAGAATLDGAPAAPRQLLRGGERVELDVELETEVHSQPEAIALTIVYEDADLLVLDKPAGLVVHPGAGNPAGTLLNGLLHHDPQLAELPRAGIVHRLDKDTSGLMVVARTLSTHTALVDLLSRHEVERQYEAVVMGTMVAGGTVDQPIGRSMGDRLRQAVRDEEDGKRAVTHYRVRERFRAHSLLQCQLETGRTHQIRVHLAHIGHPLIGDPLYGGGLKLPKGASDGLVAALRGFRRQALHAEKLSFVHPVTGEALSFTAERPADQLALIEALRADLAEHGPDPY*