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SCNpilot_expt_500_bf_scaffold_20891_6

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(4174..4977)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=2803994 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 290.0
  • Bit_score: 305
  • Evalue 6.50e-80
alternative sigma factor RpoH; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 294.0
  • Bit_score: 282
  • Evalue 1.10e-73
Tax=GWF1_Xanthomonadales_69_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 290.0
  • Bit_score: 305
  • Evalue 9.10e-80

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Taxonomy

GWF1_Xanthomonadales_69_6_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGTCCCAAGCCCTGGTGACCGCCAACTTCCCCTTGCCCAGCGTGGTTGGCAGCCTGGATGCCTACATTTCCGCAGTGCATCGCATCCCGGTGCTCAGCGTGGAAGAGGAACAGGCGTTGTCGCGTGATTATCTGCAGCAGGACAACTTGGACGCGGCCAAGAAGCTGGTGATGTCGCACCTGCGTTTCGTGGTGCACGTGGCGCGCGGCTACTCCGGCTACGGCCTGCAGCTTGCCGACCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCGGTCAAGCGTTTCGACCCGGACATGGNNNNNNNNNNNNNNNNNNNNNNNNAGGTCGCCACCACCAAGGCGCAGCGCAAGCTGTTCTTCAACCTGCGCAAGAGCAAGAAGCGCCTGGGCTGGATGAACGCCGCCGAGGTGAGCACGGTGGCGAAGGATCTCGGCGTGCCCGAGGCGACCGTGCGCGAGATGGAGTCGCGGCTGTCCGGTCGGGACGTGGGTTTCGAGGCGCCGGTGGATGCCGACGACGACGCCAAGCCGGCACCCGCCGCGTTCCTGATCGACCACGGCGCCGACCCATACGAGAACGTGGCCGACGAAGACCAGGCCGACAGCCAGTTGCAGACGCTGACCGATGCGCTGGGCCACTTGGACGCCCGCTCGCGCGACATCATCCAGCGTCGCTGGCTGGACGACGAGAACAAGGCCACGCTGCAGGATCTGGCCGACGAGTACGGCGTCTCGGCCGAGCGCATCCGCCAGGTCGAAGCCAACGCGATGAAGAAGATGCGCGCGTTGTTCGCGATGTAA
PROTEIN sequence
Length: 268
MSQALVTANFPLPSVVGSLDAYISAVHRIPVLSVEEEQALSRDYLQQDNLDAAKKLVMSHLRFVVHVARGYSGYGLQLADLIQEGNIGLMKAVKRFDPDMXXXXXXXXXVATTKAQRKLFFNLRKSKKRLGWMNAAEVSTVAKDLGVPEATVREMESRLSGRDVGFEAPVDADDDAKPAPAAFLIDHGADPYENVADEDQADSQLQTLTDALGHLDARSRDIIQRRWLDDENKATLQDLADEYGVSAERIRQVEANAMKKMRALFAM*