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SCNpilot_expt_500_bf_scaffold_1388_3

Organism: SCNPILOT_CONT_300_BF_Bacteroidetes_43_15

near complete RP 51 / 55 MC: 1 BSCG 48 / 51 MC: 4 ASCG 12 / 38 MC: 2
Location: comp(1219..2595)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein radA n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK35_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 461.0
  • Bit_score: 608
  • Evalue 6.10e-171
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 461.0
  • Bit_score: 608
  • Evalue 1.90e-171
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 461.0
  • Bit_score: 608
  • Evalue 8.60e-171

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1377
ATGAAGCAGAAAACGGCATTTTTTTGCCAGAATTGTGGTTATGAATCCAGCAAATGGGCCGGTAAATGTCCCAACTGCGGGGAGTGGAATACTTTTGTAGAGGAGATCAAGGAAAAACCTGCTGCAAAGTCAGATGTAAGCCAGCTTTGGGCAGAAACACCCCAAGTGAAGGAAAATAGCAAGGCCCAGGTGATCACGGAAATTGTTGCCGGGGATGAGATCCGTTTCCGCTTGCCCGATGAAGAACTGAACCGGGTGTTGGGTGGCGGATTGGTACAGGGCTCCGTAACCTTGGTTGCCGGAGACCCGGGTATCGGTAAGTCCACCTTGTTTTTACAAACGGCATTGGAAGCCAATCAACTGAAAGTATTATATGTTTCCGGTGAGGAAAGCGTGCACCAGATAAAAATGCGTGCCGACCGCATCGGTATTCATGCGCCGCATGTGTTTTTGCTCACAGCCACCAATACACAAACCATTTTCAACGAAATTAAGAAAGTACAACCCAACTGGGTTATTATAGATTCCATACAGACCCTGGAATCCCCTTTGATCGACAGTGCTGCCGGGAGTGTGGCCCAGGTGCGTGCTACAGCAGGGGAGTTGCAGAAGTTTGCCAAGCAGACCCAGGTGCCGGTGACCATTATCGGTCATATCACCAAAGACGGCGGTATCGCCGGGCCCAAGGTCCTGGAGCATATGGTAGATACCGTATTGCAATTTGAAGGAGACCGCCATTATGCTTACCGCATCTTGCGTACCCTTAAAAACCGCTTCGGTTCTACCTCAGAACTGGGCATTTATGAAATGGTACAAAGCGGCCTGCGTGGGGTGAGCAATCCCTCCGAGATCCTGCTGAGCCAGCATGAGGAGCTGTTGAGCGGTATTGCCAAGGCTGTCACCATAGAAGGCATGCGCCCGTTAATGATCGAGACTCAGGCATTGGTTTCACAGGCCGTGTATGGTACGCCACAGCGCACCTCCAATGGTTTTGACCTGCGCAGGCTGCAGCTATTGCTGGCCGTACTGGAAAAGCGCGGTGGTTTTCATTTCGGGATGAAAGATGTTTTCCTGCATATTGCCGGGGGCTTACGACTGGAAGACCCTTCTATAGACCTGGCGGTAGTAGGCGCATTATTATCTTCCTATGAAGATACCCCTTTGCCCGACCAGGCTTGTTTCGTGGGCGAGGTGGGCTTGTCTGGGGAGATCAGGGCGGTGAGCCGTATAGATCAGCGGATAGCCGAGGCACAGAAGATGGGCATGGAGCGTGTTTTTATCCCTAAATCCAACCTGAAAGGCCTCGATAATAATACTTTTACAATAGAAATTATTGGTCTGAACAAAGTGTCAGATATGTATCAAATGCTGTTTTAA
PROTEIN sequence
Length: 459
MKQKTAFFCQNCGYESSKWAGKCPNCGEWNTFVEEIKEKPAAKSDVSQLWAETPQVKENSKAQVITEIVAGDEIRFRLPDEELNRVLGGGLVQGSVTLVAGDPGIGKSTLFLQTALEANQLKVLYVSGEESVHQIKMRADRIGIHAPHVFLLTATNTQTIFNEIKKVQPNWVIIDSIQTLESPLIDSAAGSVAQVRATAGELQKFAKQTQVPVTIIGHITKDGGIAGPKVLEHMVDTVLQFEGDRHYAYRILRTLKNRFGSTSELGIYEMVQSGLRGVSNPSEILLSQHEELLSGIAKAVTIEGMRPLMIETQALVSQAVYGTPQRTSNGFDLRRLQLLLAVLEKRGGFHFGMKDVFLHIAGGLRLEDPSIDLAVVGALLSSYEDTPLPDQACFVGEVGLSGEIRAVSRIDQRIAEAQKMGMERVFIPKSNLKGLDNNTFTIEIIGLNKVSDMYQMLF*