ggKbase home page

SCNpilot_expt_500_bf_scaffold_2149_2

Organism: SCNPILOT_CONT_300_BF_Bacteroidetes_43_15

near complete RP 51 / 55 MC: 1 BSCG 48 / 51 MC: 4 ASCG 12 / 38 MC: 2
Location: 875..1933

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G4K0_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 352.0
  • Bit_score: 433
  • Evalue 2.70e-118
  • rbh
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:CDT02985.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 352.0
  • Bit_score: 501
  • Evalue 8.70e-139
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 355.0
  • Bit_score: 376
  • Evalue 9.40e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobacterium sp. PM2-P1-29 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1059
ATGAAAAAGATAATTCTTACCAGTGTCATTGTCATTGCTGCTTTAGCGGGCATCTTTTATGTGCTGAACAAAAACAAAGCTAAGAACGAGGCCCAGACTGCCATTGTAGCGGAGAAAAATGCAGGTGTTACCGTACGTGTAGCCGAAGCGGCTTACCAGGACATGAATATGCAATACACTTCAAACGGTGTATTTATACCAAAACAGGAAGTGAAAATTTCCGCAGAAACTCCGGGCAGAGTAGCCCGCGTTTTGGTACAGGAAGGCTCCCGTGTAGGGGCCGGTCAAACCCTGGCTATCATTGAAGGAGACAAACAAAATGTTGCGGTATCCAATGCCCAGGCTGTATTCAACAATGCCAAAGCAGAAGTAGCCCGTTTTGAAAATGCTTACTCCAGCGGTGGTGTTACTAAACAACAACTGGACCAAACCAAACTGCAACTGGAAAATGCAAAAAACAATTTGCGCAGCGCGCAACTGAATGCGACTGATGTGAACATTAAAGCTTCTTTCTCTGGTGTGGTAAACACCAAAACCATAGAGCCCGGTTCTTATGTTAATCCCGGGCAAGAATTATTCACTATTGTCAACATCAGCACCCTTAAATTGAAAGTAAACGTGGATGAAAAAACAGTAGGTGGTATTAAATTAGGTCAGAATGTAATGGTGATCAGCGCAGCACTGGCAGGACAGCAATGGACCGGTGTAGTTACGTTTATCGCACCTAAAGCGGATGGCAGCCTGAACTTCCCCGTAGAGATCGAGATCAAAAACAATGTTTCCAACGACCTGAAAGCAGGGATGTACGGTACCGCCACTTTTGGCAATGAGCAATTGAGCAATGCACTCGTGATCCCGAGAACTGCTTTTGTAGGTAACATCAGTTCCAATAAAGTATTCGTGGCAAAAGACGGCAAAGCTGTATTGAAAGAAGTAGTATCCGGCAGAAACTTCGGAGATTTTGTAGAGATCATTTCCGGTATTTCCAGCGGAGAGACCGTGATCACTACAGGCCAGATCAACCTGCTGGACGGAACACCAATCGAAATCATTAAGTAA
PROTEIN sequence
Length: 353
MKKIILTSVIVIAALAGIFYVLNKNKAKNEAQTAIVAEKNAGVTVRVAEAAYQDMNMQYTSNGVFIPKQEVKISAETPGRVARVLVQEGSRVGAGQTLAIIEGDKQNVAVSNAQAVFNNAKAEVARFENAYSSGGVTKQQLDQTKLQLENAKNNLRSAQLNATDVNIKASFSGVVNTKTIEPGSYVNPGQELFTIVNISTLKLKVNVDEKTVGGIKLGQNVMVISAALAGQQWTGVVTFIAPKADGSLNFPVEIEIKNNVSNDLKAGMYGTATFGNEQLSNALVIPRTAFVGNISSNKVFVAKDGKAVLKEVVSGRNFGDFVEIISGISSGETVITTGQINLLDGTPIEIIK*