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SCNpilot_expt_500_bf_scaffold_2149_6

Organism: SCNPILOT_CONT_300_BF_Bacteroidetes_43_15

near complete RP 51 / 55 MC: 1 BSCG 48 / 51 MC: 4 ASCG 12 / 38 MC: 2
Location: 6448..7209

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:GAL85755.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 251.0
  • Bit_score: 330
  • Evalue 1.90e-87
Two component transcriptional regulator, LytTR family id=2995281 bin=GWF2_Bacteroidetes_35_48 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 255.0
  • Bit_score: 294
  • Evalue 1.10e-76
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 251.0
  • Bit_score: 258
  • Evalue 2.10e-66

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Taxonomy

Sporocytophaga myxococcoides → Sporocytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 762
ATGAATATCATTATCATTGAAGACGAAAGACTGACCGCTGAGGACCTGAAGGACATTATCACAGACAACAATCCCGATTGCCAGGTAATCAAAATACTCAGCTCGGTGAAAGAAGCGGTGGACTACCTGCAAGCCAATCCCCAGCCGGATCTTATCTTCAGTGATATCCAACTGGGCGACGGCTTAAGTTTCGAGATCTACAAAAAAGTAAAGATCAACGTACCCATTGTTTTTTGCACGGCCTATGATGAATATGCCCTCACAGCTTTCGAGACCAACGGTATTCACTATATCCTGAAACCTTTCGATGAAGGTAAAATTGCGGAAGCCATAGAGAAATTCAAAACCCTGAAAAACTCCTTCCACAGTGAGGAAGACCATTCTTTAACGAAAGTCCTGGACCTGCTGCAAAATAAGCAAAACGAAAACTCAGGTTCCATACTGGTGTACCAGCAGGATAAAGTAATACCCGTAAAGCTTAAAAACATTGCTTTATTCTATATCAAAAATGAAGTGACTCATTTGCTGACCTTTGACCAAAAGGTTTACTACGTCAACAAATCACTGGATGAAGTACAGCAGACCTGTGGTTACGACTTCTACCGCGCCAACAGGCAATTTATCCTGAACCGGGAAGCCATAAAAGAAGTCAGCCAGACCCTCTCCAGGAAGATCTCCGTCAGCTTAAAATTTGACTTCGATGAAGACATCCTGGTAAGCAAAGAAAAAATGACCGACTTCCTGACCTGGCTTAAAGCCTAG
PROTEIN sequence
Length: 254
MNIIIIEDERLTAEDLKDIITDNNPDCQVIKILSSVKEAVDYLQANPQPDLIFSDIQLGDGLSFEIYKKVKINVPIVFCTAYDEYALTAFETNGIHYILKPFDEGKIAEAIEKFKTLKNSFHSEEDHSLTKVLDLLQNKQNENSGSILVYQQDKVIPVKLKNIALFYIKNEVTHLLTFDQKVYYVNKSLDEVQQTCGYDFYRANRQFILNREAIKEVSQTLSRKISVSLKFDFDEDILVSKEKMTDFLTWLKA*