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SCNpilot_expt_500_bf_scaffold_2463_6

Organism: SCNPILOT_CONT_300_BF_Bacteroidetes_43_15

near complete RP 51 / 55 MC: 1 BSCG 48 / 51 MC: 4 ASCG 12 / 38 MC: 2
Location: 5396..6820

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=883150 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CCUG 10230.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 470.0
  • Bit_score: 684
  • Evalue 1.30e-193
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 474.0
  • Bit_score: 675
  • Evalue 1.00e-191
protein rtcB n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000345777B similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 474.0
  • Bit_score: 685
  • Evalue 4.10e-194

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Taxonomy

Myroides odoratimimus → Myroides → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1425
ATGTCACAACAAATAAACGGAAATGACCTGATCACATTGGGTTATCCGCATAACGAACTACTGGGAATAGCGCTTAAAATCAATAAAAAAAGAACAGGCTACAAGCGTGAAGAGATGCTGCAACATTATGCTGCAGTACTGGAAAATGCAGAAAATTACCTGGACCATAAGATCTTTGGAAAGCTGGCTACAGCTATTGTATCTGGCGTGGGGACCAGGGAAGAAGAAGCTACCATATCCTTGAAAGAGCAGGCAGCAGCGTACAGCATTTACGGGGCTGCACAGATTGAAGCAGGGGCCTTAAAACAAATGAATATTGCCATGCATTTACCTGTGGCAGTTGCCGGGGCTTTGATGCCCGATGCACACCAGGGATACGGCTTACCAATCGGTGGCGTATTGGCTGCGAAGAATGCCATCATTCCTTATGGCGTAGGCGTGGATATAGGCTGTAGAATGGCCTTGTCCGTCTATGATATTCCCTATACCCATTTTGAATGGAACCAGCACCTGTATCAGGAAATTCTTTTTAAAGAGACCGCTTTCGGTGCGGGTAACGGCTTCCTGAAACAGAACAGGAGCGAGCATCCGGTGCTAGATAATCAATTGTTCGGTGAAAATAATTTTGTCTCCAGGCTGAAAGATAAAGCCTGGACACAATTAGGGAGTTCCGGGGGAGGCAACCATTTCGCTGAATTCGGGTACCTGGATTTTGAACAGGACGATGTGCCCTTAGGGATCAAAAAAGGAAGATACCTGGCCTTATTGACCCACTCCGGTTCCAGAGGCATGGGCGCGACCATAGCCGGGCATTATACCAATCTTGCCAAAGAGTTATGTAAACTGCCTTACGAGGCAAAGAACCTGGCTTACCTGGACCTGGATAGCGAAGCCGGGAATGATTACTGGCTGGCGATGAACCTGGCCGGGGACTATGCCTCTGCCTGTCATGAAGTGATCCATAACAAACTGGCATATGCATTGGGCGCACAGGTTTTAGCTAAAGTAGAGAACCATCATAATTTCGCCTGGAAAGAGATCTGGAACGGTACGGAAGTGATCGTGCATAGAAAAGGCGCTACACCAGCCGGTAAAGGGGTGATGGGTATCATTCCCGGGTCTATGACCGCTCCTGGATTCCTGGTAAGAGGAAAAGGTGAGGCCAATGCCATTAACTCTGCTTCACATGGAGCCGGAAGACAAATGAGCCGTACACAAGCCCTGAAAAATGTTTCTAAAGCGGAGATGAAAAACGCACTGGACGAGGCCGGTGTCGTATTGCTGGGAGCGGGTAGAGATGAAGCCCCTATGGCTTATAAAGACATCCACACAGTAATGGAAGCACAGGCAGACCTTGTAGATGTGATCGCAAAATTCTCGCCTAAAATGGTACGAATGGCCGATGACGGAAGCCGGGAAGATTAA
PROTEIN sequence
Length: 475
MSQQINGNDLITLGYPHNELLGIALKINKKRTGYKREEMLQHYAAVLENAENYLDHKIFGKLATAIVSGVGTREEEATISLKEQAAAYSIYGAAQIEAGALKQMNIAMHLPVAVAGALMPDAHQGYGLPIGGVLAAKNAIIPYGVGVDIGCRMALSVYDIPYTHFEWNQHLYQEILFKETAFGAGNGFLKQNRSEHPVLDNQLFGENNFVSRLKDKAWTQLGSSGGGNHFAEFGYLDFEQDDVPLGIKKGRYLALLTHSGSRGMGATIAGHYTNLAKELCKLPYEAKNLAYLDLDSEAGNDYWLAMNLAGDYASACHEVIHNKLAYALGAQVLAKVENHHNFAWKEIWNGTEVIVHRKGATPAGKGVMGIIPGSMTAPGFLVRGKGEANAINSASHGAGRQMSRTQALKNVSKAEMKNALDEAGVVLLGAGRDEAPMAYKDIHTVMEAQADLVDVIAKFSPKMVRMADDGSRED*