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SCNpilot_expt_500_bf_scaffold_1732_1

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

megabin RP 49 / 55 MC: 11 BSCG 48 / 51 MC: 11 ASCG 13 / 38 MC: 3
Location: 1..204

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YNC5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 67.0
  • Bit_score: 131
  • Evalue 2.50e-28
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 67.0
  • Bit_score: 131
  • Evalue 7.80e-29
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 67.0
  • Bit_score: 131
  • Evalue 3.50e-28

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Taxonomy

Bradyrhizobium japonicum → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
GTGCTCGCCTCGCTCACGCCGCGCGAGGAGCGCGTGCTGCGCATGCGCTTCGGCATCGGCATGAACACCGACCACACGCTGGAGGAAGTCGGCCAGCAGTTCTCGGTGACCCGCGAACGCATCCGCCAGATCGAGGCGAAGGCGCTGCGCAAGCTGAAGCATCCCAGCCGGTCAAGGAAGCTGCGGAGCTTCCTCGACAACTAA
PROTEIN sequence
Length: 68
VLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDN*