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SCNpilot_expt_500_bf_scaffold_1710_23

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

megabin RP 49 / 55 MC: 11 BSCG 48 / 51 MC: 11 ASCG 13 / 38 MC: 3
Location: 17342..18667

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=883079 species="Bacteria; Pro similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 441.0
  • Bit_score: 836
  • Evalue 2.40e-239
hypothetical protein; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 441.0
  • Bit_score: 804
  • Evalue 1.80e-230
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PI20_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 441.0
  • Bit_score: 836
  • Evalue 1.70e-239
  • rbh

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1326
ATGGATCAGTCGGCCGCCCCGAAAGTCAGTTTCGTGTCCCTGGGTTGTCCCAAGGCCCTGGTGGATTCCGAGCGCATCATCACGCGGCTGCGGGCGGAGGGCTACGAGCTCGCGCGCAAGCACGACGGCGCAGACCTCGTGATCGTCAACACCTGCGGCTTTCTCGACAGCGCCAAGCAGGAATCGCTCGGCGCCATCGGCGAGGCGATGGCCGAGAACGGCAAGGTGATCGTCACCGGCTGCATGGGCGCCGAGCCCGAGCAGATCGAAAAGGCGTATCCTAACGTGCTGTCGATCACCGGCCCGCAGCAATATGAGAGCGTGCTCGAGGCGGTGCATCGCGCGGTGCCGCCGGTGCACAACCCGCATCTCGATCTGTTGCCGCCGCAAGGCATCAAGCTGACGCCGCGGCATTACGCCTATCTGAAGATTTCCGAGGGCTGCAACAACCGTTGCACCTTCTGCATCATCCCGAAGCTGCGCGGCGACCTGGTGTCGCGGCAGGCGAATGACGTGCTGCGTGAGGCGGAACGGCTGGTTGCGGCAGGCGTCAAGGAATTGCTGGTGGTGTCGCAGGACACCTCCGCCTACGGCATCGACCTGAAATACGCGACCAGCCCGTGGAAGGATCGCGAGGTTCGCGCAAAATTCTACGATCTCGCCAGAGAGCTTGGCGAACTCGGCGCGTGGGTGCGCCTGCAATACGTCTACCCCTACCCGCATGTCGATGAGGTCATCGACCTGATGAGCGAGGGCAAGGTGCTGCCCTATCTCGACATCCCGTTCCAGCATGCAAGCCCCGACGTCTTGAAGCAGATGCGCCGGCCTGCCGCTCAGGACAAGACGCTGGCGCGGATCAAGGCGTGGCGCGAGCAATGCCCGGACCTCACGCTGCGTTCGACCTTCATCGTCGGATTTCCCGGCGAAACCGATTCTGATTTCCAGTATCTGCTCGACTGGCTGGATGAGGCGCAGATCGACCGGCTCGGCTGCTTCAAATACGAGCCGGTCGCAGGCGCGACCTCAAACAATCTCGAAGGCGCCGTGCCGGAAGAGACCAAGACCGCACGCTGGAATGCGCTGATGGCACGGCAAAAGAAAATTTCCGCGCAGCGCCTCAAGCGCAAGGTCGGCACGCGCCAGCAGGTGATCATCGACGAGGTCGGCCCCAGCGTCGCCAAGGGCCGCTCCAAGGCCGATGCGCCGCAGATCGACGGTTCGGTCTATGTCGCCAGCCGCCGCCCGCTCAAGGTCGGTGAGATCGTCACCGCGAAGATCGAGAGCGCCGACGAATACGACCTGCACGGAACGGTCGCGGGATTTTAA
PROTEIN sequence
Length: 442
MDQSAAPKVSFVSLGCPKALVDSERIITRLRAEGYELARKHDGADLVIVNTCGFLDSAKQESLGAIGEAMAENGKVIVTGCMGAEPEQIEKAYPNVLSITGPQQYESVLEAVHRAVPPVHNPHLDLLPPQGIKLTPRHYAYLKISEGCNNRCTFCIIPKLRGDLVSRQANDVLREAERLVAAGVKELLVVSQDTSAYGIDLKYATSPWKDREVRAKFYDLARELGELGAWVRLQYVYPYPHVDEVIDLMSEGKVLPYLDIPFQHASPDVLKQMRRPAAQDKTLARIKAWREQCPDLTLRSTFIVGFPGETDSDFQYLLDWLDEAQIDRLGCFKYEPVAGATSNNLEGAVPEETKTARWNALMARQKKISAQRLKRKVGTRQQVIIDEVGPSVAKGRSKADAPQIDGSVYVASRRPLKVGEIVTAKIESADEYDLHGTVAGF*