ggKbase home page

SCNpilot_expt_500_bf_scaffold_5412_4

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

megabin RP 49 / 55 MC: 11 BSCG 48 / 51 MC: 11 ASCG 13 / 38 MC: 3
Location: 2914..3525

Top 3 Functional Annotations

Value Algorithm Source
Polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P777_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 199.0
  • Bit_score: 372
  • Evalue 3.30e-100
  • rbh
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:EKS37331.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 199.0
  • Bit_score: 372
  • Evalue 4.60e-100
polyhydroxyalkanoate synthesis repressor PhaR similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 201.0
  • Bit_score: 333
  • Evalue 5.30e-89
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGTGTAATTCCATGGCCAAATCCGATCAGCCAATTACGATTAAAAAATACGCCAATCGGCGCCTCTACAACCCCGGCACCAGCACCTATGTGACGCTCGAAGACCTCGCCGCGATGGTGAAGGAAGGTGAGGACTTTCTCGTCTATGACGCCAAGACCGGCGACGACATCACCCGGTCTGTCCTGGCCCAGATCATCTTTGAACAGGAGAACAAGGCCGGACAGAACCTCTTGCCGACGACCTTCCTGCGCCAGCTGATCCGCTTCTATGGCGACAGCATGCAGATGGTGGTGCCGAAATATCTCGAGCAGTCCATCGACACCCTGACGCGCGAGCAGGAAAAATTCCGCAAGCAGATGACCAACACCTTCAGCAACACGCCGTTCGCGCCGCTGGAGGAGCATGTCCGCCGCAACATGGAAATGTTCGAGCGGACGTTCGCGATGTTCAAACCGTTCGGCGCGCCGACCCGTAAGGAGCCGCCAGCGTCCGATTCACCGCCGACCGCGAACGATGCGAACGACGCGGATATCGACGATCTCAAGCGCCAGATGAAGGAAATGCAGGATCGTCTCGAGCGGATGTCGAAAGAGCCCGAGAGCAAGAGCTGA
PROTEIN sequence
Length: 204
MCNSMAKSDQPITIKKYANRRLYNPGTSTYVTLEDLAAMVKEGEDFLVYDAKTGDDITRSVLAQIIFEQENKAGQNLLPTTFLRQLIRFYGDSMQMVVPKYLEQSIDTLTREQEKFRKQMTNTFSNTPFAPLEEHVRRNMEMFERTFAMFKPFGAPTRKEPPASDSPPTANDANDADIDDLKRQMKEMQDRLERMSKEPESKS*