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SCNpilot_expt_500_bf_scaffold_1331_7

Organism: SCNPILOT_CONT_500_P_Rotifera_33_75

partial RP 42 / 55 MC: 35 BSCG 20 / 51 MC: 9 ASCG 28 / 38 MC: 22
Location: comp(4943..5221)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 isoform X2 n=1 Tax=Melopsittacus undulatus RepID=UPI00038324F1 similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 91.0
  • Bit_score: 124
  • Evalue 5.40e-26
PSMD12; proteasome (prosome, macropain) 26S subunit, non-ATPase, 12; K03035 26S proteasome regulatory subunit N5 similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 91.0
  • Bit_score: 121
  • Evalue 1.10e-25
26S proteasome non-ATPase regulatory subunit 12 {ECO:0000313|EMBL:KGL87771.1}; Flags: Fragment;; TaxID=50402 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Charadriidae; Charadrius.;" source="Charadrius vociferus (Killdeer) (Aegialitis vocifera).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 91.0
  • Bit_score: 121
  • Evalue 4.90e-25

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Taxonomy

Charadrius vociferus → Charadrius → Charadriiformes → Aves → Chordata → Metazoa

Sequences

DNA sequence
Length: 279
ATGGCCAAATACTATACTCGTGTTCGAACGCAACGTATGGCCGATTTACTTGATTTAACAAAAGATGAAGCTGAACAATTCTTATCGAATCTTGTTTCGAATAAAACAATCAGTGCTAAAGTCGATCGTCTTGCCGATATAATTACATTTCAACCGAAGAAAAGTCCACAGGAAATTCTTAATGAATGGTCGGTTAATTTGAATTCATTGATGACAATTATTAATAAAACATGTCATTTAATCAACAAAGAAGAAACTGTTCATGCTGTACGGAATTAA
PROTEIN sequence
Length: 93
MAKYYTRVRTQRMADLLDLTKDEAEQFLSNLVSNKTISAKVDRLADIITFQPKKSPQEILNEWSVNLNSLMTIINKTCHLINKEETVHAVRN*