ggKbase home page

SCNpilot_expt_500_bf_scaffold_2131_28

Organism: SCNPILOT_CONT_500_P_Rotifera_33_75

partial RP 42 / 55 MC: 35 BSCG 20 / 51 MC: 9 ASCG 28 / 38 MC: 22
Location: comp(17881..18159)

Top 3 Functional Annotations

Value Algorithm Source
Receptor protein serine/threonine kinase {ECO:0000256|SAAS:SAAS00138132}; EC=2.7.11.30 {ECO:0000256|SAAS:SAAS00138132};; TaxID=32264 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Acariformes; Trombidiformes; Prostigmata; Eleutherengona; Raphignathae; Tetranychoidea; Tetranychidae; Tetranychus.;" source="Tetranychus urticae (Two-spotted spider mite).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 72.0
  • Bit_score: 70
  • Evalue 1.30e-09
PREDICTED: LOW QUALITY PROTEIN: TGF-beta receptor type-1-like n=1 Tax=Metaseiulus occidentalis RepID=UPI0002657323 similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 77.0
  • Bit_score: 72
  • Evalue 1.90e-10
GI20087 gene product from transcript GI20087-RA; K13569 TGF-beta receptor, invertebrate similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 77.0
  • Bit_score: 67
  • Evalue 1.90e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tetranychus urticae → Tetranychus → Acari → Arthropoda → Metazoa

Sequences

DNA sequence
Length: 279
GTGCATTTGCTTCGTTTTATTAATTTATTTTGTTTGTTTGCCTGTTTCAAGGATATTTCATGTCGAATTGAATTGTGGCTTGCAACTGAATACCATGAAAATGGTTCACTTTATGATTATCTAATAAATCATACGATTAATCCTCGAATTTTATCTCAAATGGTTTATAGTATAGCAAACGGTTTATGGCATTTGCATGTCCCTATCGATGCCACCAACGGTATGAATTGCGTCTTTTCTTTTTTTTTTATTGAAAATATGATTTTATTTTCTTTTTAA
PROTEIN sequence
Length: 93
VHLLRFINLFCLFACFKDISCRIELWLATEYHENGSLYDYLINHTINPRILSQMVYSIANGLWHLHVPIDATNGMNCVFSFFFIENMILFSF*