ggKbase home page

SCNpilot_expt_500_bf_scaffold_5273_12

Organism: SCNPILOT_CONT_500_P_Rotifera_33_75

partial RP 42 / 55 MC: 35 BSCG 20 / 51 MC: 9 ASCG 28 / 38 MC: 22
Location: comp(9298..11169)

Top 3 Functional Annotations

Value Algorithm Source
Ubiquitin carboxyl-terminal hydrolase {ECO:0000256|RuleBase:RU004435}; EC=3.4.19.12 {ECO:0000256|RuleBase:RU004435};; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.2
  • Coverage: 603.0
  • Bit_score: 609
  • Evalue 5.20e-171
USP5; ubiquitin specific peptidase 5 (isopeptidase T); K11836 ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.1.2.15] similarity KEGG
DB: KEGG
  • Identity: 49.9
  • Coverage: 617.0
  • Bit_score: 595
  • Evalue 1.80e-167
  • rbh
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V4AUZ0_LOTGI similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 603.0
  • Bit_score: 609
  • Evalue 3.70e-171

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lottia gigantea → Lottia → Gastropoda → Mollusca → Metazoa

Sequences

DNA sequence
Length: 1872
ATGACTGATAAATTTCAAAATGTTCGTGTGCCCGGTTCGAATGATAGTGTCTACAAAGACGAATGTCTTTATTCATTCGATAATCCTGAATCCGAAACTGGTCTTTACATTTGCATGTCAACATTCCGTGGCATCGGAAAAAATCATCTCGATCGACATTGTAAAGCAAATCCAGGCAAAAATGTCTTTTTGCATCTTCTTCGAAAACGTTTGCCGGTACCAATCGATCCAACTGCTGAACCGAAACAAGTCACAAAGTTAGCCATCGGCATCGAAGGAGGTTTCGATGTGAATTCATCGAGTCGATTTACATTCGACGAGAAATATTCGATTTATATTCATCCAAATCAAACGATTCCCTATCCCGATGAAACAAATCAATTGCCTGAACAAGTCAAACGATCGGCTGAAGCGATTATCAAAGCTGATTCGGCTTTTCTCAAAGAAGAACAATCACTGATGAACGCAACTTGGAATGGCGAATTTCGTCAAACGACAAAACACACACAAACATTGAAACAATTGGACAACGGACGACGAATTCCACCATCGGGATGGAAATGTGAAAAATGTGATTTGACCGATAATCTTTGGTTGAATTTAACTGATGGCGCAATTCTTTGCGGACGAAAATTTTTCGACGGAACCGGAGGAAATAATCATGCAGCTGAACATTATTATAATACGAGATATCCACTTGCTGTTAAACTCGGCACAATTACGGCTAAAGGTGCAGATGTTTATTCTTATGATGAAGATGATATGGTCGAAGATCCAAATCTTGGTATTCATTTATCACATTGGGGAATTAATATGATTAAAATGGAGAAAACAGATAAATCCATGGCCGATTTAGAAATAGCTTTGAATAAAAAATTTGGCGAGGCTTCTATGATTGAAGAAAGTAATTCAAAATTACAGCCTGTCTATGGAGGAGGTTATACAGGAATGAGAAATCTCGGCAATTCATGTTACATGAATTCTGTTATGCAAGTTCTATTTTCTCTCAAAGACTTCCAAGATAAATATTACACACAACGTAATTTCTATTTCGACAATGCTAAAGATCCAGCTCGTGATTTCAATGCTCAAACAGCTAAATTAGCCGATGGTTTACTATCGGGTGTCTATTCGAAACAGCCAGCAGCTGAGATCGATGTGTCTCTCCAAGAACCGTCGGGTATTCGTCCGCAAATGTTTCGATCGTTGATCGGTCGCAATCATCCGGACTTTTCGACAAAACAACAACAAGATGCAGCTGAATTTCTTGAATATTACATCGAACAAGTTCATAATCATTGTCAAAAAGATCCGTCACCTGATCGAAATTTCGATCCAAGTACAAGTTTTCAATTTGAATTAGAAGAACGTATCTATTATCCGGAAACTGAACAAGTACGATATTTAAAACGAGAAGAAACCATGTTCAGATTGAATGTTACGTTGGGTGCAGCGAGAAATATGCATGATGTTTTACAATACAATAAAACACTCGAAGATTTAGAAAAACAAGGAGTTAGAACGAATGATTTAGCTGTCGTACGACCGATTATTCCTTTGATAGAAAGTATTTCCGAATGGGCAGCACCGGAAGAAATTAAAGGTTATAAATTACCACAAAGTGACCGACAAACAACGATCTCTAAAACGCAAAAATTCGTTAACTTTCCCGATTATCTTGTTGTTCAATTGAAAAAATATGCATTCAATTCTGATTGGACACCGAAGAAATTAGATGTTTCCATGGAAATACCGGATGAACTTGATCTTAACTCATTACGTGCAACTGGATTCCAACATGGTGAAAATCTAATGCCTAATGGTAAATTTCTTTCAAATTTTTTTTCCTTATTCGACAAGATTGTTGCGTAG
PROTEIN sequence
Length: 624
MTDKFQNVRVPGSNDSVYKDECLYSFDNPESETGLYICMSTFRGIGKNHLDRHCKANPGKNVFLHLLRKRLPVPIDPTAEPKQVTKLAIGIEGGFDVNSSSRFTFDEKYSIYIHPNQTIPYPDETNQLPEQVKRSAEAIIKADSAFLKEEQSLMNATWNGEFRQTTKHTQTLKQLDNGRRIPPSGWKCEKCDLTDNLWLNLTDGAILCGRKFFDGTGGNNHAAEHYYNTRYPLAVKLGTITAKGADVYSYDEDDMVEDPNLGIHLSHWGINMIKMEKTDKSMADLEIALNKKFGEASMIEESNSKLQPVYGGGYTGMRNLGNSCYMNSVMQVLFSLKDFQDKYYTQRNFYFDNAKDPARDFNAQTAKLADGLLSGVYSKQPAAEIDVSLQEPSGIRPQMFRSLIGRNHPDFSTKQQQDAAEFLEYYIEQVHNHCQKDPSPDRNFDPSTSFQFELEERIYYPETEQVRYLKREETMFRLNVTLGAARNMHDVLQYNKTLEDLEKQGVRTNDLAVVRPIIPLIESISEWAAPEEIKGYKLPQSDRQTTISKTQKFVNFPDYLVVQLKKYAFNSDWTPKKLDVSMEIPDELDLNSLRATGFQHGENLMPNGKFLSNFFSLFDKIVA*