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SCNpilot_expt_500_bf_scaffold_6405_2

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 11 / 55 BSCG 15 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(1856..3799)

Top 3 Functional Annotations

Value Algorithm Source
Rhamnan synthesis F; K07272 rhamnosyltransferase [EC:2.4.1.-] similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 625.0
  • Bit_score: 471
  • Evalue 4.00e-130
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KI94_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 638.0
  • Bit_score: 727
  • Evalue 1.30e-206
  • rbh
Rhamnan synthesis protein F {ECO:0000313|EMBL:KJL37255.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 633.0
  • Bit_score: 730
  • Evalue 2.10e-207

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1944
ATGACAGACGAGAGCGCGCAGCTGCCTGCACCGTCGCCCGTTGCTCCCCCCGCGCCCTTCGCTCAGGATGGTCGCCGTCTCGTCGTCTACGTCGTGTATGACCGGCGTGGTGAGCTCGACCCCTTCGTCGAACATGCGCTGCGCGGGTTGCGCGAGTACAGCTCGCACATCCTCGCGGTCGTCAACGGCTCGCTCAGTGACGAGGCCCGCACGAGGCTGGCGGCGGTGTCGGACGACATCCTGGTGCGCTCGAACCGCGGGTATGACATCTGGGCACACAAAGAGGGCATGGCGCACGTGGGCGATCTGTCGGGCTTCGACGAGGTCATCCTCGCCAACGACACGTGGTTCGGACCGGTGCGCCCGTTCGGCCCCGTCTTCGATCGTATGGATGCCACGCGGGTGCACCTGTGGGGCATGACCGACCACGCCGAGCAGATTCCCAACCCGTTCACCGGGGACGGACGGCTGCCGTGGCATCTGCAGTCGTTCTGGCTGGCCGCGCGCCCGGAGCTCTTCCTCAGCGCGGACTGGGAGGCATATTGGCGTGATCTGCCGGCCATGGACCGGTACGAGGATGCCGTGCTGCTGCACGAGACGATCTTCACGGAGCACTTCACGTCGCGCGGCTACACGGCCCTTGCCGCGTATCCGTGCGCGGACTATCCGACCGATCACCCGGCGCTGTTCAACGCCGATCTGCTGCTCGCCGACGGCTGCCCTCTGTTGAAGCGGCGCCCGTTCTTCCACTACCCCCCGTTCCTCGACCGGCACGCGGTGATCGGCCGCGAGCTCATCCGGGCGGTCGAGGAGTACGGCTACCCCGTAGAGCTCGTCTGGCAGAACCTGGCGCGCAATGTGCCGCCGCGCACACTCAACGCCGATGCGGGCATGCTCGAGGTACTGCCTGAGGTCGACGTCGCCTACGACGAGGCTCGACCGCAGCGCATCGCGGCGATCGTGAACGTGGTGCACGAGGCGATGGCCGATGAGCTGCTGGACCGCATCGGCTACCTGCCCGACCCCGTGGACGTCTTCGTCACGACACCGGTCGCGGGTCTCGTCGACGGGCTGCGCGAGCGGCTCGCGGCCCGGGAAGGGGCCCGATACGCGAATGCTGACGTCCGGCTTGTGCCGACGCGTCGCGGCCGGCACATGAGCGCCTTCCTCATCGGATGCGCCGATGTGCTCGTCCCGGGCCGTTACGACCTGATCGTCAAGATCCACTCGAAGCGGTCGCGCAGCAAGCCCTACAACGTGAGTCGCTACTTCGCTCGACACCAGATCGAGAACCTGCTCAGCTCGCCCGGGTACGTCCGCAACCTTCTGGCGCTGTTCCAGCGCGAACAGGGGCTCGGTGTCGTCTTCCCGCCGACGATGCACATCGGGTTGCCCATGCTGGGCTCGGGCTGGTCGTCGTACCGAAAGCGGGTCGAGGCACTTCTGTCGGGGCTCGGCGTACGTGTGCCCATCGACGAGGTGTCGCCACTCGCGCCGATGGGTGGAATGTGGATCGCGCGCCCCGAGGCGATGAGGTTGCTGACGGAGCATTCGTGGAGCTACGGCGACTACCGCACGGATCCCACCTACCCCGAGGCGCGGCTGGCGGCGGCGCAGGAGCGCTCGATCGCGTATATCGCGGGGGAGGGCGGCTATCACTGCCGCACCGTTCTCAACGCCGAGCACGCCGCGATCAGTCACACCGCGCTTGAGTTCGGCCTCGATCAGCTCTCGTCGACCACTCCGGGGTATCCCATCGAACAGATCCAGTTCTTGCACCGTGCCGGCTGGATGTCGCACGGCGGAGCCGTTCCGCTCACCATGATGTACCTGCGGATGAACCATCCGAGGGTGGTGCGGGTCGTCGACCCGCTCTACCGCACCGCACGGGGGTCCGTGCTGTGGGCGAAGTCTGTCCTCTCGCGACTGCGAGGTCGGCGATGA
PROTEIN sequence
Length: 648
MTDESAQLPAPSPVAPPAPFAQDGRRLVVYVVYDRRGELDPFVEHALRGLREYSSHILAVVNGSLSDEARTRLAAVSDDILVRSNRGYDIWAHKEGMAHVGDLSGFDEVILANDTWFGPVRPFGPVFDRMDATRVHLWGMTDHAEQIPNPFTGDGRLPWHLQSFWLAARPELFLSADWEAYWRDLPAMDRYEDAVLLHETIFTEHFTSRGYTALAAYPCADYPTDHPALFNADLLLADGCPLLKRRPFFHYPPFLDRHAVIGRELIRAVEEYGYPVELVWQNLARNVPPRTLNADAGMLEVLPEVDVAYDEARPQRIAAIVNVVHEAMADELLDRIGYLPDPVDVFVTTPVAGLVDGLRERLAAREGARYANADVRLVPTRRGRHMSAFLIGCADVLVPGRYDLIVKIHSKRSRSKPYNVSRYFARHQIENLLSSPGYVRNLLALFQREQGLGVVFPPTMHIGLPMLGSGWSSYRKRVEALLSGLGVRVPIDEVSPLAPMGGMWIARPEAMRLLTEHSWSYGDYRTDPTYPEARLAAAQERSIAYIAGEGGYHCRTVLNAEHAAISHTALEFGLDQLSSTTPGYPIEQIQFLHRAGWMSHGGAVPLTMMYLRMNHPRVVRVVDPLYRTARGSVLWAKSVLSRLRGRR*