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SCNpilot_expt_500_bf_scaffold_7488_2

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 11 / 55 BSCG 15 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 929..2011

Top 3 Functional Annotations

Value Algorithm Source
xpbC; DNA or RNA helicase of superfamily II; K10843 DNA excision repair protein ERCC-3 [EC:3.6.4.12] similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 66.0
  • Bit_score: 121
  • Evalue 7.30e-25
ATP-dependent DNA helicase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XQI9_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 67.0
  • Bit_score: 128
  • Evalue 1.50e-26
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:KJL31337.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 67.0
  • Bit_score: 128
  • Evalue 2.00e-26

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
GTGGACGCTGCGCCCGTACCAGCGGAAGGCCGTCGACATCTTCACCGAGGGCGGATCGGGTGTCGTCGTGCTCCCCTGCGGCGCCGGGAAGACCCTCGTCGGGGCGGCCGCGATGGCCGACACGAAGACGACGACGCTCATCCTCGTGACGAACACCGTCAGCGCTCGGCAGTGGCGCGACGAACTCCTCAAGCGCACGTCGCTCACCGCCGACGAGATCGGCGAATACTCGGGGCAGGCGAAGGAGGTCAAGCCCGTCACGATCGCGACATACCAGATCCTCACCGCGAAGCGGAAGGGCGAGTACGCGCACCTCGCCCTGCTGGACGCCCTCGACTGGGGCCTCATCGTCTACGACGAGGTCCACCTGCTGCCGGCACCGGTGTTCAAGCTGACGGCGGAGCTGCAGGCGCGGCGACGCCTCGGTCTCACGGCGACGCTCGTGCGCGAGGACGGCCGCGAGGGCGACGTGTTCAGCCTCATCGGCCCCAAGCGCTTCGACGCGCCCTGGAAGGAGATCGAGGCGCAGGGCTTCATCTCCCCCGCCGTCTGTTACGAGGTGCGCGTCGACCTGCCGCCCGGGGATCGCATGGAGTACGCCGCCGCGGCCGACGACGAGCGCTACCGGTTGGCTGCGACAGCGCACGCGAAGATCGGGGTCGTGAAGGACCTCGTCGCGAAGCACGCCGGAGAGCAGATCCTCGTCATCGGGCAGTACCTCGACCAGATCGACGTGCTGTCCGACGCGCTGGACGCCCCGCAGATCACCGGGGCGACGCCCGTCGACGAGCGCGAAGAACTGTACGGCGCGTTCCGCGAGGGGCGCATCCCGGTGCTCGTCGTCTCGAAGGTCGCGAACTTCTCGATCGACCTGCCCGAGGCTCGTTCGGCTCACGCCAGGAGGAGGCCCAGCGCCTCGGCCGGCTGCTGCGCCCGAAGAAGAGCGGCCACACGGCGAGCTTCTACACCCTCATCGCCCGCGACACGGTCGACCAGGACTTCGCCCAGAACCGGCAGCGGTTCCTCGCGGAGCAGGGCTACAGCTACACGATCCTCGACGCCGAGGAGCTCCGCGCCGCGTAA
PROTEIN sequence
Length: 361
VDAAPVPAEGRRHLHRGRIGCRRAPLRRREDPRRGGRDGRHEDDDAHPRDEHRQRSAVARRTPQAHVAHRRRDRRILGAGEGGQARHDRDIPDPHREAEGRVRAPRPAGRPRLGPHRLRRGPPAAGTGVQADGGAAGAATPRSHGDARARGRPRGRRVQPHRPQALRRALEGDRGAGLHLPRRLLRGARRPAARGSHGVRRRGRRRALPVGCDSAREDRGREGPRREARRRADPRHRAVPRPDRRAVRRAGRPADHRGDARRRARRTVRRVPRGAHPGARRLEGRELLDRPARGSFGSRQEEAQRLGRLLRPKKSGHTASFYTLIARDTVDQDFAQNRQRFLAEQGYSYTILDAEELRAA*