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SCNpilot_expt_500_bf_scaffold_1579_12

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(9219..9938)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000382F0D4 similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 238.0
  • Bit_score: 415
  • Evalue 4.00e-113
  • rbh
cAMP-binding protein {ECO:0000313|EMBL:EJE50046.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 239.0
  • Bit_score: 411
  • Evalue 6.20e-112
Crp/Fnr family transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 239.0
  • Bit_score: 408
  • Evalue 2.00e-111
  • rbh

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Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGACCCCGCAAGCCATCAAAGTCGCCTGCTCCAACTGCAACCTGCGCGAGTTGTGCATGCCGATGGGGCTGTCGGACGATGAAATGGGCCGGCTCGACGATCTGGTGGCCACCCGGCGCAAGATCAAGCGCGGCACCTCGCTGTTCGCCAATGGCGACCGATTCACCGCGCTCTATGCCATTCGCACGGGCTTCTTCAAGACCTGCATTGCCACCGCCGATGGGCGCGACCAGGTGACGGGCTTCCAGATGGCCGGCGAAGTCATCGGTCTGGATGGCATCGTGGGCGACCGCCACACCTGTGATGCCGTGGCGCTGGAAGACGCCGAGGTCTGCGTCATGCCCTACGACCGCATCGAGGAGCTGTCGCGCGAGGTGCAGGCCCTGCAGTCGCACGTGCACAAGATCATGAGCCGCGAGATCGTGCGCGAGCATGGCGTGATGCTGCTGCTGGGCAGCATGCGGGCCGAGGAGCGCCTGGCGGCCTTTCTGCTGAACCTGGTGCAGCGGCTGCACGCACGGGGCTTTTCGCAGTCGGAGCTGGTGCTGCGCATGACGCGCGAGGAGATCGGCAGCTACCTGGGCCTGAAGCTGGAGACCGTCAGCCGCACCTTCTCGAAGTTCGCCGAGGAAGGCATCGTCGAAGTCAAGCAGCGCCATGTGCGCATCGTGGACACCGAGGCGTTGCGGGCCATCGTGAACGCGCCCAGCTGCGACTGA
PROTEIN sequence
Length: 240
MTPQAIKVACSNCNLRELCMPMGLSDDEMGRLDDLVATRRKIKRGTSLFANGDRFTALYAIRTGFFKTCIATADGRDQVTGFQMAGEVIGLDGIVGDRHTCDAVALEDAEVCVMPYDRIEELSREVQALQSHVHKIMSREIVREHGVMLLLGSMRAEERLAAFLLNLVQRLHARGFSQSELVLRMTREEIGSYLGLKLETVSRTFSKFAEEGIVEVKQRHVRIVDTEALRAIVNAPSCD*