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SCNpilot_expt_500_bf_scaffold_1579_20

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 16859..17770

Top 3 Functional Annotations

Value Algorithm Source
Candidate ABC transporter probably involved in cobalamin transport, periplasmic component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y645_RAMTT similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 298.0
  • Bit_score: 323
  • Evalue 2.60e-85
cobalamin ABC transporter periplasmic protein; K02016 iron complex transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 298.0
  • Bit_score: 323
  • Evalue 8.20e-86
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 281.0
  • Bit_score: 326
  • Evalue 4.30e-86

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGAGCCGGGCGGCCTGGACTTCACGCGCCCACTGGTGCCGGCGGCTTGGCCTGAGGGCCGGCACGGCCCTGGTGTCGATGCTGTTGCTGCTGGGCGCCGCCGCCCGGGCCGCAGGCGAGATCGTCGACGACGCGGGCCAGCGCACGCGCCTGGACGCCGCGCCGGCGCGCGTCGTCAGCCTGCTGCCCTCGCTCACCGAAACCGTGTGCGCGCTCGGCGCCTGCGAGCGCCTGGTCGGCGTCGACCGCTATTCCAACTGGCCGGCCAGCGTGCAGAAGCTGCCGCAACTGGGCGGCGGGCTGGACCCGAACATCGAGGCCGTGGTGGCGGCCCGACCCGACGTGGTGCTGATCGGCACCTCCTCGCGCGCGGCGGTGCGGCTGCGCGCGCTGGGCCTGAAGGTGGTGGCGCTGGAGCCGCGCACCCGCGCCGACCAGCGCCGCGTCACGCGCCTGCTGGGCCGGCTGCTGCGGGTGGACGGGGCCGACGCGCTGGTGCAGCGCATCGACGACGGCGTGGCCGCCGCCGCGGCCGCCCTGCCGGGCGCGGCGCGCGGCCGGCGCGTGTATTACGAGGTCGATGCCGCGCCCCACGCCGCCGGGCGCGGCACCTTCATCGACGAGCTGCTGCAGGCGCTGGGCCTGGTCAACATCATCGACGCCGGGCTGGGGCCGTATCCCAGGATCAACCCCGAGCTGGTGGTGCGCGCCGATCCCGACCTCGTCATGGTCAGCCAGCAGGGCGCCGCCGAGCTGGCGCGCCGCCCCGGCTGGGCGCGGCTGCGCGCGCTGCGGGGCGGCCATGTGTGCGAGTTCGACGCCGCCCAGCGCGACATCCTGGTGCGCCCCGGCCCGCGCATGCCTGAAGCCGCGCGCCTGATGGCCGACTGCGCGGCGCGCTCGCTGAAATGA
PROTEIN sequence
Length: 304
MSRAAWTSRAHWCRRLGLRAGTALVSMLLLLGAAARAAGEIVDDAGQRTRLDAAPARVVSLLPSLTETVCALGACERLVGVDRYSNWPASVQKLPQLGGGLDPNIEAVVAARPDVVLIGTSSRAAVRLRALGLKVVALEPRTRADQRRVTRLLGRLLRVDGADALVQRIDDGVAAAAAALPGAARGRRVYYEVDAAPHAAGRGTFIDELLQALGLVNIIDAGLGPYPRINPELVVRADPDLVMVSQQGAAELARRPGWARLRALRGGHVCEFDAAQRDILVRPGPRMPEAARLMADCAARSLK*