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SCNpilot_expt_500_bf_scaffold_2838_1

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 3..908

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 287.0
  • Bit_score: 477
  • Evalue 1.10e-131
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 287.0
  • Bit_score: 475
  • Evalue 1.30e-131
DNA-directed RNA polymerase subunit beta' n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T742_ACIDE similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 287.0
  • Bit_score: 477
  • Evalue 8.20e-132

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Taxonomy

Acidovorax delafieldii → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
CTGCACCCGCTGGTGTGCGCGGCCTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTGCCGCTGTCGGTGGAAGCGCAGATGGAAGCGCGCACGCTGATGCTGTCGTCCAACAACGTGCTGTTCCCGGCCTCGGGCGAGCCCTCCATCGTGCCCTCGCAGGACGTGGTGCTGGGCCTGTACTACACCACGCGCGAGCGCATCAACGGCAAGGGCGAGGGCATGGTCTTTGCCGACATCGGCGAAGTCGAGCGCGCCCTGGCCGCCGGCGTGGTCGAGCTGACCGCCCGGATCAGCGTGCGCCTGACCGAATGGAGCAAGGACAAGGCGACCGGTGAATTCACGCCATCCACCAGCGTGGTCGAAACCACCGCCGGCCGCGCCCTGTTGTCGGAGATTCTGCCCAAGGGCCTGCCGTTCTCGCAGATGAACAAGGCGCTCAAGAAGAAGGAAATCTCGCGCCTGATCAACGCCAGCTTCCGCAAGTGCGGCCTGAAGGAAACCGTGGTTTTTGCCGACAAGCTGCTGCAAAACGGCTTCCGGCTGGCCACGCGCGCCGGCATCTCGATCGCCATCGAGGACATGCTGGTGCCGAGCGAGAAGGCCGGCATCATCGAGCGCGCCGAAAAAGAGGTCAAGGAAATCGAGCAGCAGTACGTCTCGGGCCTGGTCACCGCCGGCGAACGCTACAACAAGGTGGTCGACATCTGGGGCAAGGCCGGCGACGAAGTCTCCAAGGTCATGATGGCCCAGCTGGCCAAGCAAAAGACCCAGGATCGCCACGGCAAGGAGCGCGCGCGGCAGCGCGGCGCAGATTCGCCAGCTGGCGGGCATGCGCGGCCTGATGGCCAAGCCCGACGGCTCGATCATCGAGACGCCCATCACGGCCAACTTCCGTGA
PROTEIN sequence
Length: 302
LHPLVCAAFNADFDGDQMAVHVPLSVEAQMEARTLMLSSNNVLFPASGEPSIVPSQDVVLGLYYTTRERINGKGEGMVFADIGEVERALAAGVVELTARISVRLTEWSKDKATGEFTPSTSVVETTAGRALLSEILPKGLPFSQMNKALKKKEISRLINASFRKCGLKETVVFADKLLQNGFRLATRAGISIAIEDMLVPSEKAGIIERAEKEVKEIEQQYVSGLVTAGERYNKVVDIWGKAGDEVSKVMMAQLAKQKTQDRHGKERARQRGADSPAGGHARPDGQARRLDHRDAHHGQLP*