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SCNpilot_expt_500_bf_scaffold_3607_8

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 8457..9071

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y8E0_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 222.0
  • Bit_score: 217
  • Evalue 1.80e-53
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 222.0
  • Bit_score: 217
  • Evalue 5.60e-54
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 221.0
  • Bit_score: 222
  • Evalue 4.50e-55

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Taxonomy

R_Burkholderiales_63_240 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGAAAGCTGTGCTTGTCGTCGAGGACCTGCCGGACATCCGTGCCTGGCTGGTCGAGACCGCCCATATCGCGTTTCCTGGCACCGAGGTGGTGGCGGCGGGTCGCTGTCGCGAGGGCATCGACGCGCTGGCGCGGCAGGCGTTCGACGTCGTGCTGGTCGATCTCGAACTGCCCGATGGCAGCGGGGTGTCGGTGATCCGCGCGCTGCGCCAGCAGCAGCCGGCCGCGGTGCCGGTGGTGGTCACCATCCACGACGACGACGAGCACCTGTTCCCCGCGCAGGACCTGGTGACCCAGCTGCGGCGCATTGCCGACGGCGAGCCGCCGCTGTCGCCGCCGATCGCGCGCCGCATCCTGGCCTACTTCAGCCATGGCGGCCCGCGCGTGGTCGACGTCACCCGCTTCGACCCCCACGAGGCGGTGCTGAACGCCCGCGAAACCGACATCCTGCAGCGCGTCGCCAAGGGCTACACCCTGCCCGAGATCGCCGGTCAGCTGCATCTGTCGCGCCACACGGTGGCCGACTACGTCAAGCAGATTTACCGCAAGCTCAACGTCTCCTCGCGCGCCGAGGCGGCGCTGGAGGCGGCGCGCCGCGGGCTGGTGCGGCCCTGA
PROTEIN sequence
Length: 205
MKAVLVVEDLPDIRAWLVETAHIAFPGTEVVAAGRCREGIDALARQAFDVVLVDLELPDGSGVSVIRALRQQQPAAVPVVVTIHDDDEHLFPAQDLVTQLRRIADGEPPLSPPIARRILAYFSHGGPRVVDVTRFDPHEAVLNARETDILQRVAKGYTLPEIAGQLHLSRHTVADYVKQIYRKLNVSSRAEAALEAARRGLVRP*