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SCNpilot_expt_500_bf_scaffold_4138_20

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(14895..15494)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family id=1261993 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 200.0
  • Bit_score: 211
  • Evalue 7.20e-52
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 197.0
  • Bit_score: 209
  • Evalue 8.70e-52
Tax=BJP_08E140C01_Burkholderiales_65_30 similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 200.0
  • Bit_score: 212
  • Evalue 6.00e-52

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Taxonomy

BJP_08E140C01_Burkholderiales_65_30 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGTCCGAGCAGGCCGCCACGGCCGACGAAGCCCTCATGCGCGCCTATGCCGGCGGCGACACTCGTGAGTTTGAAACGCTGTACGACCGGCATGCCACGCGCGTCTGGCGCTACATTTTTCGCGGCACGCGCGACAATGCCACGGCCGACGAACTGGCGCAGGACGTGTGGCTGCGGGTGGCGCGCGCCGCGCCCGGCTACGCACCGAGCGCCGCCACGGCGCAGCGGCCGGTGGCGCGCTTCACCACCTGGCTGCTCACCCTCGCCCACCACCGGGTGGTCGATCACTTGCGCCAGCAGCGGCCCACGCAGAGCCTGGACGAGCCGCTGCACGACGAGCGCACGCTGGCCGACACGCTGGCCGCGCCCTCCGGCTTCGGTCCGCTGCGCCAGATCGAAAGCCGCCAGCAGGCCGCGCAGTTGCTGGCCGCGCTGGACGCGTTGCCGCCCGAGCAACGCCACGCCTTCCTGCTGCAGGCCGAGGGCGGGATGAGCGTGGCCGAAATCGCCGACGCCACCGGCGTCGGCCTGGAAACCGCCAAGAGCCGCCTGCGCTACGCCCGCACCGCGCTGCGCCGGGCGCTGGAGGACATCGCATGA
PROTEIN sequence
Length: 200
MSEQAATADEALMRAYAGGDTREFETLYDRHATRVWRYIFRGTRDNATADELAQDVWLRVARAAPGYAPSAATAQRPVARFTTWLLTLAHHRVVDHLRQQRPTQSLDEPLHDERTLADTLAAPSGFGPLRQIESRQQAAQLLAALDALPPEQRHAFLLQAEGGMSVAEIADATGVGLETAKSRLRYARTALRRALEDIA*