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SCNpilot_expt_500_bf_scaffold_14814_1

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(2..268)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 89.0
  • Bit_score: 193
  • Evalue 3.70e-47
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=5083764 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 89.0
  • Bit_score: 193
  • Evalue 7.00e-47
Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 89.0
  • Bit_score: 193
  • Evalue 9.80e-47

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGAAATCGCTGCTCGACCTGTTCAAGCAATTCACCCCGGATGAGCACTTCGATGCCATCCGCATCGGCCTGGCTTCACCCGAGAAGATCCGTTCCTGGTCCTTCGGCGAGGTGAAGAAACCCGAGACCATCAACTACCGCACCTTCAAGCCCGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTCGGCCCCATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTGAAGCACCGCGGCGTGATCTGCGAGAAGTGCGGC
PROTEIN sequence
Length: 89
MKSLLDLFKQFTPDEHFDAIRIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICEKCG