ggKbase home page

SCNpilot_expt_500_bf_scaffold_8092

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8092_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..476)
DNA (474bp) protein (158aa)
methyl-accepting chemotaxis sensory transducer, partial n=1 Tax=Sphingomonas elodea RepID=UPI0002632212
Chemotaxis protein {ECO:0000313|EMBL:AJP73824.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCNpilot_expt_500_bf_scaffold_8092_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

641..1066
DNA (426bp) protein (142aa)
succinate dehydrogenase n=1 Tax=Sphingomonas elodea RepID=UPI0002632213
Succinate dehydrogenase {ECO:0000313|EMBL:AJP73823.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
succinate dehydrogenase cytochrome b556 subunit; K00241 succinate dehydrogenase cytochrome b556 subunit
SCNpilot_expt_500_bf_scaffold_8092_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1403..3202
DNA (1800bp) protein (600aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
succinate dehydrogenase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B70820
Fumarate reductase {ECO:0000313|EMBL:AJP73821.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCNpilot_expt_500_bf_scaffold_8092_4
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3272..3484)
DNA (213bp) protein (71aa)
Plasmid maintenance system antidote protein, XRE family n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EGS5_9SPHN
Plasmid maintenance system antidote protein, XRE family {ECO:0000313|EMBL:EHJ59518.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
putative plasmid maintenance system antidote protein
SCNpilot_expt_500_bf_scaffold_8092_5
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3584..4135
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVT8_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCNpilot_expt_500_bf_scaffold_8092_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4249..5223
DNA (975bp) protein (325aa)
peptidase C13, legumain asparaginyl peptidase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003644D9D rbh
Peptidase C13 {ECO:0000313|EMBL:AJP73818.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8092_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5530..5958
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000367485E
Peptidase S14 {ECO:0000313|EMBL:AJP74717.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
Displaying 7 items

View Taxonomy