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SCNpilot_expt_500_bf_scaffold_605_24

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(18014..18763)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631D5A similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 248.0
  • Bit_score: 415
  • Evalue 5.40e-113
  • rbh
Membrane protein {ECO:0000313|EMBL:AJP73559.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 248.0
  • Bit_score: 400
  • Evalue 1.90e-108
putative permease similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 247.0
  • Bit_score: 307
  • Evalue 2.90e-81

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGATCACCGATTGGCATTTCTACGCGCTTGCCGTGCCGGCGGTGATCCTGCTCGGCCTGAGCAAGGGCGGGTTCGCCGGCATGGGCGCGTTGTCGCTGCCGCTCCTCGCCTTCGCGGTCGACCCGGTGCGCGCCGCGGCGATCACCCTGCCGATCCTGATCGCGCAGGACGTGGTGGGCGTCTGGGCGTTTCGCCGCACGGTCGACTGGTGGCTGCTCGGCTGGATGCTGCCCGGCTCGATGCTCGGCATCGCGCTCGGCTATGGATTCGCGGCGAGCGTCTCCTCGGCTGCGGTGATGGGGATGGTCGGGGCGATCTCGATCCTGTTCGGTGCCTATCGGCTCTGGGCCGCCAGCCATGCCGCGCCGCGCGACCCCGCGCGCTGGCCCGACTGGATCGGATCGCTGTTCGGCATCGCCTCGGGCTTCACCAGCCAGATCGCCCATGCCGGCCAGCCGCCCTTCCAGCTCTGGGTGCTGCCTCGCAACCTGCCGCGCGACCTGCTGGTCGGCACCACCGCGCTCTTCTTCGCCGCGACCAACTGGATCAAGGTGCCGGCCTATTGGGCGCTAGGCCAGTTCACGTCCGCCAACGTCATGACGTCGGCCGCGTTGCTGCCGCTCGCATTGGTTTCCACCGTCGCCGGCGTCCGGCTGGTGCGCAGGGTCGATGCGGCGCGCTTCTACACCGCGATCCATGTGCTGATGATCCTGGTCGGCATCGCCCTTGTCGCCGAGGCGGCATTCTAG
PROTEIN sequence
Length: 250
MITDWHFYALAVPAVILLGLSKGGFAGMGALSLPLLAFAVDPVRAAAITLPILIAQDVVGVWAFRRTVDWWLLGWMLPGSMLGIALGYGFAASVSSAAVMGMVGAISILFGAYRLWAASHAAPRDPARWPDWIGSLFGIASGFTSQIAHAGQPPFQLWVLPRNLPRDLLVGTTALFFAATNWIKVPAYWALGQFTSANVMTSAALLPLALVSTVAGVRLVRRVDAARFYTAIHVLMILVGIALVAEAAF*