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SCNpilot_expt_500_bf_scaffold_733_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(1..336)

Top 3 Functional Annotations

Value Algorithm Source
surface adhesion protein, partial n=1 Tax=Pseudomonas putida RepID=UPI00036E39D3 similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 113.0
  • Bit_score: 119
  • Evalue 1.60e-24
Uncharacterized protein {ECO:0000313|EMBL:GAM02317.1}; Flags: Fragment;; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 112.0
  • Bit_score: 142
  • Evalue 3.20e-31
surface adhesion protein similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 114.0
  • Bit_score: 119
  • Evalue 5.10e-25

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Taxonomy

Sphingomonas parapaucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
GTGACCGGCACCGGCGAGCCCGGCGCGACGGTGACCGTCCATGACGCCGCCGGCAATCCGCTCGGCACCGGCCCGGTCGCGGCCGATGGCAGCTTCTCGATCACCCTGACCACGCCCCAGGCCAACGGCCAGTTGCTGGAAGTCTCGCAGACCGATCCTGCAGGCAACGCCTCGCCCGATGTGGCGGTGCACGCACCCGACATCACGGCCCCGCTCGGCCTCACCGCTGCGGTGAACGGCGTCGGCACGGTGGTGAGCGGCAGCGGCGAGGCGGGCGCGACCGTCACCGTCCGCGACCCTTCCGGCATCGCGATCGGCACGGCCGTAATTGCCGCG
PROTEIN sequence
Length: 112
VTGTGEPGATVTVHDAAGNPLGTGPVAADGSFSITLTTPQANGQLLEVSQTDPAGNASPDVAVHAPDITAPLGLTAAVNGVGTVVSGSGEAGATVTVRDPSGIAIGTAVIAA