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SCNpilot_expt_500_bf_scaffold_841_10

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(9312..9965)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Sphingobium sp. AP49 RepID=J2DDV8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 199.0
  • Bit_score: 184
  • Evalue 1.00e-43
Transcriptional regulator {ECO:0000313|EMBL:EJK80962.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 199.0
  • Bit_score: 184
  • Evalue 1.50e-43
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 193.0
  • Bit_score: 131
  • Evalue 4.30e-28

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Taxonomy

Sphingobium sp. AP49 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
GTGGCGGCAGCAGCTTCGGGCAGCAAGCGTCGGACACAGGCGGAACGCACTGCGGAAACGCGGGAAGCGCTGCTCGATGCCGCGATAGGATTGCTCTACCGCAAGGGCTATAGCGGCACCTCGACCGAAGCGATCGCGGAGGAAGCCGGCGTGACCCGCGGCGCGCTCCACCATCATTTCGGCACGCGCGTCCAGTTGATGGCCGATGTGATCGGGACCGTCTACGAGCGCGAGAAGCGCGCCTATGAACGGATCGCGGCAGACACCGGCCGCGGCGCGCGCCTCTCCGACTGGCCCGAAATGCTCTGGGAAGTGCTGAGCAGGCCCTCCGGCCTCGCCGTGCTCGAGATACTTCAGGCATCGCGCAGCGATCCCGAGCTGGCCGAGCTGGTCACGCCGATGCAGGCGAAGGTGGAGCAGATGTCGCTCGAAACCATCAAGCAGCAGTTCGGCAGCGGAGAGGATGGCGACGTGCTCGCCGGGATCCGCCTGTTCGTCTGGGCCGTGCGCGGGCTGTCGATCGCGCAGGTCCTTGCGCCGAACCCCGCGGAGATGCGGCGCTCGATCGATTTCCTGCGGCTGCTGATCGACGGCGCGACGAGCGCGGGCGTCATCGACTCGCGGGGGCGCCCGGTCGCGTTGCCGAACGGCTGA
PROTEIN sequence
Length: 218
VAAAASGSKRRTQAERTAETREALLDAAIGLLYRKGYSGTSTEAIAEEAGVTRGALHHHFGTRVQLMADVIGTVYEREKRAYERIAADTGRGARLSDWPEMLWEVLSRPSGLAVLEILQASRSDPELAELVTPMQAKVEQMSLETIKQQFGSGEDGDVLAGIRLFVWAVRGLSIAQVLAPNPAEMRRSIDFLRLLIDGATSAGVIDSRGRPVALPNG*