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SCNpilot_expt_500_bf_scaffold_904_10

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(13332..13988)

Top 3 Functional Annotations

Value Algorithm Source
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:AJP74687.1}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 215.0
  • Bit_score: 393
  • Evalue 2.70e-106
rpe; ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 217.0
  • Bit_score: 342
  • Evalue 1.20e-91
ribulose-phosphate 3-epimerase n=1 Tax=Sphingomonas elodea RepID=UPI0002630756 similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 218.0
  • Bit_score: 396
  • Evalue 1.30e-107
  • rbh

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGGCCGTCCGCATCGCACCTTCGATCCTCTCCGCCGATTTCGCCAAGCTGGGCGAGGAAATCCGCGCCATCGACGCGGCGGGAGCCGACTGGATCCATGTCGACGTGATGGACGGGCATTTCGTGCCCAACATCACGATCGGCCCGGGCGTGATCAAGGCGTTGCGCCCGCACACGGCCAAGCCGTTCGACGTGCACCTGATGATCGCCCCGGTGGATCCGCTGCTCCAGGCCTTTGCCGATGCCGGTGCCGATTGCATCTCGGTCCATCCGGAATCGGGCCCGCATCTCCACCGCACGCTCCAGACGATCAAGGGCCTGGGCAAGCGCGCCGGCGTGGTGCTCAATCCTTCCACGCCGGTGGACGCCGTCGACTATGTCATGGACATGATCGACCTCATCCTGGTGATGAGCGTGAACCCCGGCTTCGGCGGGCAGAAGTTCATCGAGAGCCAGCTGGGCAAGATCGCCGAGCTGCGCAGGCGGATCGATGCCAGCGGCCGCGCGATCGACCTGGAGGTGGATGGCGGGATCGACCGCGAGACGGCCCCGCGCGCCATCGCCGCGGGTGCCGATGCGCTGGTCGCCGGCACCGCCACCTTCACCGGCGGCCCCAGTCGATACGCGGCGAACATCGCCGCCCTGCGAGGCGGGTGA
PROTEIN sequence
Length: 219
MAVRIAPSILSADFAKLGEEIRAIDAAGADWIHVDVMDGHFVPNITIGPGVIKALRPHTAKPFDVHLMIAPVDPLLQAFADAGADCISVHPESGPHLHRTLQTIKGLGKRAGVVLNPSTPVDAVDYVMDMIDLILVMSVNPGFGGQKFIESQLGKIAELRRRIDASGRAIDLEVDGGIDRETAPRAIAAGADALVAGTATFTGGPSRYAANIAALRGG*