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SCNpilot_expt_500_bf_scaffold_904_17

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 18226..19140

Top 3 Functional Annotations

Value Algorithm Source
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260, ECO:0000313|EMBL:AJP73645.1}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 304.0
  • Bit_score: 432
  • Evalue 5.60e-118
hemC; porphobilinogen deaminase (EC:2.5.1.61) similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 301.0
  • Bit_score: 363
  • Evalue 5.50e-98
  • rbh
porphobilinogen deaminase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00035EDA1B similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 304.0
  • Bit_score: 446
  • Evalue 2.70e-122
  • rbh

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGGCCGTTTTCAAACTGGGTACCCGGGGTTCGCCGCTCGCGCTGACACAGGCGGAGATGGTGCGCGACGCGCTCGCCGCCGCGCACAAGCGGCCCGCAAGCGACTTCGAGATCGTCGTGATCCGCACCACCGGCGACAAGGTGCAGGACCGTCCGCTCGCCGAGATCGGCGGCAAGGCGCTGTGGACCAAGGAGCTCGACCGGGCCCTGCTCGCCGGCGAGATCGACGCTTCGGTCCATTCGATGAAGGACGTCGAGACGCTGCGCCCCGATATGATCGCCATCGCCGCGATGCTGCCCCGCGCCGATGTGCGCGACCGGCTGGTCGGTGCCCCGTCGATCGCGGCGATCCCGCAGGGCGGCGTGCTGGGCACCAGTTCGCCGCGCCGGGCCGCGCAGATCCGGCGGCTGCGGCCCGATCTTTCGGTCACGCTGTTCCGCGGCAATGTCGACACGCGGCTGGCCCGGCTGGCGCAGGGCGAGGCCGATGCGACCTTGCTCGCCGCGGCCGGACTCGACCGGCTCCGGCGCCATGACGTCGGCACGCCGATCCCCACCAACATCCTCCTCCCCGCGCCGGCCCAGGGAGCAGTGGGCGTCGAGATTCGCGCCGACGATGCCCATGCCCGCGAGATGCTGCGGGCGATAGACCATGTGGAGACGCATGCCTGCATCGCCGCCGAGCGCGCGCTGCTGGCGGCGCTCAAGGCCGGCTGCCACTCGCCCGTCGCCGCGCTGGCGACGATCGCGGGCGGCATCCTGACGCTCGAGGCCGAGCTGCTCTCGGAAGACGGCGCCGCCCATGTCCATGGCGCGATCGAGGGGGCACCGCTCGACCATGCCCTGCCCGCCGCGCTTGCCCGCGACCTGCTGGCACGGGCGCCGGCAGCGGTGCGCCGATTGTTCGAGGGGTGA
PROTEIN sequence
Length: 305
MAVFKLGTRGSPLALTQAEMVRDALAAAHKRPASDFEIVVIRTTGDKVQDRPLAEIGGKALWTKELDRALLAGEIDASVHSMKDVETLRPDMIAIAAMLPRADVRDRLVGAPSIAAIPQGGVLGTSSPRRAAQIRRLRPDLSVTLFRGNVDTRLARLAQGEADATLLAAAGLDRLRRHDVGTPIPTNILLPAPAQGAVGVEIRADDAHAREMLRAIDHVETHACIAAERALLAALKAGCHSPVAALATIAGGILTLEAELLSEDGAAHVHGAIEGAPLDHALPAALARDLLARAPAAVRRLFEG*