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SCNpilot_expt_500_bf_scaffold_904_22

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 22490..23596

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydratase n=1 Tax=Sphingomonas elodea RepID=UPI00026319DF similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 368.0
  • Bit_score: 644
  • Evalue 8.10e-182
  • rbh
CoA-transferase {ECO:0000313|EMBL:AJP73649.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 367.0
  • Bit_score: 628
  • Evalue 6.40e-177
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 368.0
  • Bit_score: 537
  • Evalue 2.60e-150

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
ATGAAGCCGCTGGCGGGAATCAGAGTCGTCGAGCTGGCGCGGATCCTCGCCGGGCCCTGGTGCGGGCAGCTGCTCGCCGATCTGGGCGCCGAGGTGGTGAAGGTCGAGCGGCCGGGCGAAGGCGACGACACCCGGCATTGGGGGCCGCCCTTCCTCCACGATGCCGAGGGCGAAAATCGCGACGCCGCCTATTTCCACGCCTGCAACCGCGGCAAGGAGAGCCGGGCGATCGACATCGCCACGCCCGAGGGGCAGGCGGCGGTGCATGCGCTGGTGGCGGACGCCGATGTGGTGATCGAGAACTACAAGGTCGGCGGGCTGGTGAAATACGGGCTCGACGCGGCTTCGCTGCGAGCGCGCCATCCGCGGCTGATCGTCTGCTCGATCACCGGCTTCGGCCAGACCGGCCCCTATGCGCCGCGCGCGGGCTATGATTTCATCATCCAGGGCATGGGCGGCTTCATGTCGCTGACCGGCGAGCCCGACGGCCCACCGGAAAAGGCGGGCATCGCCTATGCCGACATCTTCACCGGCGTCTATTCGGCGGTGGCGATCCTGGCGGCGCTGCGCCGGCGCGACGTGACCGGCGCGGGCGCGCATATCGACATGGCGCTGCTCGACACCCAGGTGGGCGTGCTCGCCAACCAGGCGCTGGGCTGGATGGCATCGGGCAAGGTGCCCCACCGGATGGGCAACGGACACGCCAATCTGGTGCCCTATCAGGCGTTCCAGGCGCGGGACGGCGAACTGATCATCGCGGTGGGCAATGATTCGCAGTTCCGCAAGCTGTGCGGGGTGCTGGGGCTCGACTATTGCGCCGATCCGCGCTTCGCGACCAATCCGCAGCGGGTGGTCAACCGCGCGGCGCTGATCCCGCTGCTGGAAGCGGCGATCCGGCAATGGGCCAAGGCCGATCTCTACGAGGCGCTGGAGGCCGAAGGCGTGCCGGCCGGGCCGATCAACAGCGTCGACGAAGTGTTCGCCGATCCGCAGGTGGTGGCGCGGGGCATGAAGATCGCGCGCGACGGCCTGCCCGGCATCGCCACGCCGATCATGATCGACGGCGAGCGCATGGCCGCCGACCGAGCCAGCCCCAGGCGGCCCTGA
PROTEIN sequence
Length: 369
MKPLAGIRVVELARILAGPWCGQLLADLGAEVVKVERPGEGDDTRHWGPPFLHDAEGENRDAAYFHACNRGKESRAIDIATPEGQAAVHALVADADVVIENYKVGGLVKYGLDAASLRARHPRLIVCSITGFGQTGPYAPRAGYDFIIQGMGGFMSLTGEPDGPPEKAGIAYADIFTGVYSAVAILAALRRRDVTGAGAHIDMALLDTQVGVLANQALGWMASGKVPHRMGNGHANLVPYQAFQARDGELIIAVGNDSQFRKLCGVLGLDYCADPRFATNPQRVVNRAALIPLLEAAIRQWAKADLYEALEAEGVPAGPINSVDEVFADPQVVARGMKIARDGLPGIATPIMIDGERMAADRASPRRP*