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SCNpilot_expt_500_bf_scaffold_916_9

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(8750..9283)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GT07_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 177.0
  • Bit_score: 279
  • Evalue 1.90e-72
Response regulator receiver protein {ECO:0000313|EMBL:KGB59077.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 173.0
  • Bit_score: 282
  • Evalue 3.20e-73
response regulator receiver protein; K15012 two-component system, response regulator RegA similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 177.0
  • Bit_score: 279
  • Evalue 6.10e-73

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Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGACCGCCATCCGCAAGCTGCTGATCGTCGAGGACGACGAAGCCTTTGCGCGGACGCTGCGCCGTTCGTTCGAGCGGCGCGGATACATGGTGGAGGTCGCGGCGAGCCATGAGGCGCTGACCGCGCTGCTCGAGCGGTTCGACCCCGCCTATGCCGTGGTCGACCTCAAGCTCGGGGGCGCCTCGGGGCTGGTCTGCGTGCAGACGCTGCGCGCGGCCGATGCGGCGATGAAGATCGTCGTGCTGACCGGCTTCGCCAGTATCGCCACCGCCGTGGAGGCGATCAAGCTCGGCGCTTCCTATTATCTCGCCAAGCCCTCCAACACCGACGACATCGAAGCGGCATTCGGGCGCGAGGAGGGTGATCCCGACGCGCCGCTCGCCGGCCGGCCCTCATCGATCAAGACGGTGGAATGGGAGCATATCCACCAGACCCTGGTGGAGACCGACTTCAACATCTCCGAGACCGCGCGACGGCTGGGGATGCACCGCCGTACGCTCGCGCGGAAGCTGGAGAAGCGGCAACTGCGCTAG
PROTEIN sequence
Length: 178
MTAIRKLLIVEDDEAFARTLRRSFERRGYMVEVAASHEALTALLERFDPAYAVVDLKLGGASGLVCVQTLRAADAAMKIVVLTGFASIATAVEAIKLGASYYLAKPSNTDDIEAAFGREEGDPDAPLAGRPSSIKTVEWEHIHQTLVETDFNISETARRLGMHRRTLARKLEKRQLR*