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SCNpilot_expt_500_bf_scaffold_1386_18

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 16752..17249

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheY n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E139D3 similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 164.0
  • Bit_score: 243
  • Evalue 1.40e-61
Chemotaxis protein CheY {ECO:0000313|EMBL:AJP71640.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 165.0
  • Bit_score: 256
  • Evalue 3.00e-65
Fis family nitrogen metabolism transcriptional regulator NtrC; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 160.0
  • Bit_score: 148
  • Evalue 1.50e-33

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
GTGCCGCTGCTCGCCCGCCATTTCCTCGACCGCGCCGCCGAGGACGGCCTGCCGCGCAAGAGCCTCGCGGCCGATGCGGTGCGGGTACTCGAAGGCTATGACTGGCCGGGCAATGTTCGCCAGCTCGAGAATCTGATGCGCCGTATCGCCGCGCTCAGCCGCGACGAAGTGATCGACGGGGAGGCGCTGCGCCGGGCACTGGGCGAGACTGGCTCGCTGCCCGTCCAGTCGAGTCGCGACGAGGGTATCGAGGCGGCGGTGCGCGCCCGGCTCGAACGCATCGCGATCGAAGAGCCGCGCACGCTCGACGACGGCACGCTCTACGACCGGATCATCGGCGAAGTGGAGCGCCCCCTGATCGAGGCGATGCTGGCCCGCCATGGCGGCAATCAGCTGCGTGCCGCCCGCGCCCTGGGGATCAATCGCAACACCTTGCGCAAGCGCCTCGATACGCTGGGCATCGATCTTGGTCCCAATCGCCCGGATGGTGCCGAATAG
PROTEIN sequence
Length: 166
VPLLARHFLDRAAEDGLPRKSLAADAVRVLEGYDWPGNVRQLENLMRRIAALSRDEVIDGEALRRALGETGSLPVQSSRDEGIEAAVRARLERIAIEEPRTLDDGTLYDRIIGEVERPLIEAMLARHGGNQLRAARALGINRNTLRKRLDTLGIDLGPNRPDGAE*