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SCNpilot_expt_500_bf_scaffold_1386_21

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(20975..21292)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262BD8E similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 104.0
  • Bit_score: 168
  • Evalue 2.90e-39
Cation/cationic drug transporter {ECO:0000313|EMBL:KEZ20830.1}; Multidrug transporter {ECO:0000313|EMBL:KFD25895.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 104.0
  • Bit_score: 168
  • Evalue 4.00e-39
small multidrug resistance protein; K11741 quaternary ammonium compound-resistance protein SugE similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 105.0
  • Bit_score: 160
  • Evalue 3.20e-37

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Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
GTGGCCTGGATTCTGTTGTTCTTCGCCGGCCTGCTCGAGATCGTCTGGGCGTTCGCCATGAAGCAGTCGCACGGTTTCACCCGGCTATGGCCCAGCGTGACGACGATCGGCGCGATGCTCGGAAGCTTCGGGCTGCTCGCGCTCGCGATGCGCAGCCTGCCGCTGGGTACGGCCTATATGGTCTGGACCGGCATCGGTGCGATCGGCGCATTCGCGCTGGGCGTGCTGGTGCTCGGCGAGAGCGCGGGCGCGCTGCGGCTCGCGGCCGCGGCGATGATCCTGGGCGGGCTGGTGCTGATGAAGCTCGCCTCCTCCTAG
PROTEIN sequence
Length: 106
VAWILLFFAGLLEIVWAFAMKQSHGFTRLWPSVTTIGAMLGSFGLLALAMRSLPLGTAYMVWTGIGAIGAFALGVLVLGESAGALRLAAAAMILGGLVLMKLASS*