ggKbase home page

SCNpilot_expt_500_bf_scaffold_1386_27

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 25608..26144

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000365AC71 similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 171.0
  • Bit_score: 212
  • Evalue 2.90e-52
Uncharacterized protein {ECO:0000313|EMBL:AJA08100.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 173.0
  • Bit_score: 248
  • Evalue 8.80e-63
RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 165.0
  • Bit_score: 128
  • Evalue 3.00e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGAACGAACTGACCGCCATCGTCGCGCGCCGCCATGCGGCGGCCGAGGAAGTAGCGCTGCGCGCCGCGCTCCAGCGCTTCGTCGAGGGCCGGCTGCGCGATCGGGACGAGGGCGAGGATATCGTCCAGGAAACCTATGTCCGCCTCTATGACTATCGCCGCACGCGCGGCGTCGCCGATGTCGGCGCCTTCTGCTTCGCGGTGGCGCGCAACCTGGTCTTCGATCATTTCCGGCGTCGCCGCGCGATGCCGGAGGCCGCCGAACTGGCCGAGGACATCGCCTGCCCCCTGCCGCGGGCCGAGGAAGTCCTGGATTATCGCCAGCGCGTGGAAATCCTGGTCGCGGCACTCAAGGTGATGCCGCCGCTGCGCCGCGAGGTGTTCCTGCGCCGCCGGCTCGACGGCGTGGCCTGCGCCATCATCGCCGCCGACCTCGAGATGAGCCTCGCCGCGGTGGAGAAGCATTGCACCCGCGCGGTCGCCGATCTGCGCGCGGCGCTCGAACGGCGCGGCTTGCCGGCAGGGGCTGCCCGGTGA
PROTEIN sequence
Length: 179
MNELTAIVARRHAAAEEVALRAALQRFVEGRLRDRDEGEDIVQETYVRLYDYRRTRGVADVGAFCFAVARNLVFDHFRRRRAMPEAAELAEDIACPLPRAEEVLDYRQRVEILVAALKVMPPLRREVFLRRRLDGVACAIIAADLEMSLAAVEKHCTRAVADLRAALERRGLPAGAAR*