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SCNpilot_expt_500_bf_scaffold_2264_14

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 13427..14305

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC977 similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 296.0
  • Bit_score: 348
  • Evalue 5.60e-93
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:AJP74612.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 291.0
  • Bit_score: 367
  • Evalue 2.10e-98
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 291.0
  • Bit_score: 295
  • Evalue 2.30e-77

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGAACTCCATCGACTGGGAGCAGCAGCGCGCCTTTCTGGCGGTGCTCGAGACCGGCAGCCTGTCGGGCGCGGCGCGGCGGCTCAACCTTGCGCAACCGACGGTCCGGACGCGGATCGAGGCGCTGGAGGCGGCGCTGGGCACGCCGCTGTTCACGCGTTCCCCCGGCGGCCTCACGCCCACGGAGAGGGGATCGGCGCTGCACGAGCATGCCCGCGCGATGGCGCTCGCTTCGGAGGCGTTCGTCCGCACCGCCTCGGCGGCGCCGGACGAGATCGCCGGCACGGTGCGCGTCACCGCCAGCGAAGTGATCGCGGTGGAGGCGTTGCCGCCGGTCCTCACCGCCCTTGCCCGCCGATATCCGCGCCTGGTGATCGAGCTGAGCCCGAGCAACCGCAACGAGGACGTGCTGCGCCGCGAGGCCGATGTCGCCGTCCGGATGGCGCCGCCCCGCCAGGAAGCGCTGGTCGCGCGGCGGATCGGCACGGTGCCGCTCGGCGTGCACGCGCATCCGGACTATCTTGCCGGCCGCCCGCATCCCGTCCACTTCGCCGATCTCGCCGGCCACCGGCTGATCGGGCCCCAGAGCGATTCGCCGACGCTGCGCGCGGTGCAGGCGGCGGGCTTCCCCGTGAAGCTTGGCGAACTGGGCTTCCGCAGCGACAGCGACCATGCCCAGCTCGCCGCCATCCGCGCGGGGCTGGGCATCGGCATCTGCCAGCTGCCGATCGGCACGCGCGACGGGCTGGTCAGGCTGCTGCCCGACTTCCGGCTCGACCTCGAGACCTGGGTGGTCTGCCACGAAGACCTGCGCGGCCTGGCCCGCGTGCGCACGGTGTTCGACGCGCTGGTTGCCGGGCTCCAGGCCTATCTCGGTTAG
PROTEIN sequence
Length: 293
MNSIDWEQQRAFLAVLETGSLSGAARRLNLAQPTVRTRIEALEAALGTPLFTRSPGGLTPTERGSALHEHARAMALASEAFVRTASAAPDEIAGTVRVTASEVIAVEALPPVLTALARRYPRLVIELSPSNRNEDVLRREADVAVRMAPPRQEALVARRIGTVPLGVHAHPDYLAGRPHPVHFADLAGHRLIGPQSDSPTLRAVQAAGFPVKLGELGFRSDSDHAQLAAIRAGLGIGICQLPIGTRDGLVRLLPDFRLDLETWVVCHEDLRGLARVRTVFDALVAGLQAYLG*