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SCNpilot_expt_500_bf_scaffold_1705_15

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(19142..19792)

Top 3 Functional Annotations

Value Algorithm Source
Alpha-ketoglutarate-dependent dioxygenase AlkB {ECO:0000313|EMBL:EYR82234.1}; EC=1.14.11.33 {ECO:0000313|EMBL:EYR82234.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 215.0
  • Bit_score: 309
  • Evalue 3.00e-81
DNA-N1-methyladenine dioxygenase (EC:1.14.11.-); K03919 alkylated DNA repair protein [EC:1.14.11.-] similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 215.0
  • Bit_score: 307
  • Evalue 2.50e-81
  • rbh
Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVR7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 215.0
  • Bit_score: 309
  • Evalue 2.10e-81

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGGCTGACCTGTTCACTCCGCTGCTCGCGGAGGAGCCCGCACGCGAAACCCTTGCCGATGGTGCGATGCTCCTGCGCGGACTGGCACTGCCGTTCGCGCCGGCGCTGATCGAGGCGATCCATGGCATCGCCGCCATTTCGCCCTTCCGGCACATGGTCACGGCGGGCGGCCATGCCATGTCGGTCGCCACGACCAACTGCGGCGCGGCCGGGTGGGTCAGCGATCGGAGCGGCTATCGCTACGACGCGATCGACCCGGAAACCCGCAAGCCATGGCCGGAGATGCCCGAATGCTTCGCGGCGCTGGCGGAACTGGCGGCGATACAGGCCGGCCATGCGCAATTCCGGCCGGACGCGTGCCTGATCAATCGCTATGTGCCCGGCGCGCGCCTGTCGCTGCATCAGGACCGGAACGAGCGGGACTTCGCGCAACCGATCGTCTCGGTTTCGCTCGGGCTGCCCGCCATCTTCCGGTTCGGGGGGATCAGGCGCAGCGATCCGGTACGCAAGTTCGCCCTGCATCATGGCGACGTCGTCGTCTGGGGCGGGCCGGCGCGCCTTCGCTTCCACGGCGTGGCGGAGCTGAAGGACGGCTTCCATGACCAGTTGGGCCGGCAGCGCATCAACCTGACCTTCCGGCACGCCCGCTGA
PROTEIN sequence
Length: 217
MADLFTPLLAEEPARETLADGAMLLRGLALPFAPALIEAIHGIAAISPFRHMVTAGGHAMSVATTNCGAAGWVSDRSGYRYDAIDPETRKPWPEMPECFAALAELAAIQAGHAQFRPDACLINRYVPGARLSLHQDRNERDFAQPIVSVSLGLPAIFRFGGIRRSDPVRKFALHHGDVVVWGGPARLRFHGVAELKDGFHDQLGRQRINLTFRHAR*