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SCNpilot_expt_500_bf_scaffold_1705_17

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(21298..21969)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037BC0C4 similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 220.0
  • Bit_score: 236
  • Evalue 2.40e-59
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EZP49023.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.5
  • Coverage: 220.0
  • Bit_score: 237
  • Evalue 1.50e-59
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 224.0
  • Bit_score: 207
  • Evalue 4.80e-51

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGCGCTTGCTGATCGTAGAAGATGATGCGGACCTCGCCCATGCGATGGTTTCGGCATTTGCGAAGCGCGACGTGCGTTGCGACCTTGCCAGGACCGCGGGCGATGCCGAGCTCCTGATCCAGACCATCAACTATGCGGCCATCGTCCTCGATCTCGGCCTCCCCGACGAGAACGGCCTTGCCCTGTTGCGGCGCCTGCGCGCCTATAAGCGCATGGAACCAATTCTCGTGCTGACCGCACGCGGCGAGGGGGAGATGCGCGTCCAGGGGCTGGATAGCGGTGCCGACGACTATATCGTCAAACCCTTCCTCTTTCCCGAACTGCATGCGCGGATCTGCGCGGTGCTCCGCCGGCAGGGCGGCTATGTCGAACATCTCCTCGCCGTGGGAGACCTGTCGCTGGATACCCGGACCCGCGAAGTGCGGGTGGGAGGCGAGCCTGCCGATTTTTCGGAACGCGAGGCCGAACTGCTCGAGCTGCTGATGCGTCGATCGGGCCATGTCCTCTCCAAGCGCGTCATCGAGGATCAGCTATTCGGCTCGGGGGACATGCTGGGCTCGAACGCAGTGGAAGTGTATATTCACCGGATCCGACGAAAACTGGACAGCGTTGCGGCACAGGTCAGGCTCAAGACCGTGCGCGGCATCGGCTACATATTGCTGAACTCGTGA
PROTEIN sequence
Length: 224
MRLLIVEDDADLAHAMVSAFAKRDVRCDLARTAGDAELLIQTINYAAIVLDLGLPDENGLALLRRLRAYKRMEPILVLTARGEGEMRVQGLDSGADDYIVKPFLFPELHARICAVLRRQGGYVEHLLAVGDLSLDTRTREVRVGGEPADFSEREAELLELLMRRSGHVLSKRVIEDQLFGSGDMLGSNAVEVYIHRIRRKLDSVAAQVRLKTVRGIGYILLNS*