ggKbase home page

SCNpilot_expt_500_bf_scaffold_1705_19

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 22502..22750

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037D53F9 similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 69.0
  • Bit_score: 77
  • Evalue 5.20e-12
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 64.0
  • Bit_score: 64
  • Evalue 1.40e-08
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 61.0
  • Bit_score: 76
  • Evalue 1.60e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_Sphingopyxis_65_19 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGGAAGAACGAGCGCATTCCTATGACCATCTCACTCCCCGCGAACTGCAGGTCCTCGATCTCGCCGCCGGCGGTTTCTGTGCGAAGGAAATCGCCAGACGGCTCGAGATCAGTCCGAAGACCGTGGATCGCCACGTCGAGAACATTCGCCTGAAGCTTCGTGCCCGCAACCGCGCCCATATGATCCAGCTGGCGTTCCGGTTCGGTCTCCAAGGTCACCTCGACATTCCCTTCATCATCGCCGGTTGA
PROTEIN sequence
Length: 83
MEERAHSYDHLTPRELQVLDLAAGGFCAKEIARRLEISPKTVDRHVENIRLKLRARNRAHMIQLAFRFGLQGHLDIPFIIAG*