ggKbase home page

SCNpilot_expt_500_bf_scaffold_2502_4

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 6424..7083

Top 3 Functional Annotations

Value Algorithm Source
Two-component response regulator protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8SIM7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 218.0
  • Bit_score: 259
  • Evalue 4.40e-66
Two-component response regulator protein {ECO:0000313|EMBL:EZP81260.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 218.0
  • Bit_score: 259
  • Evalue 6.10e-66
transcription response regulator protein; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 218.0
  • Bit_score: 213
  • Evalue 5.10e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium resinovorum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGGCGCGCCTACTCCTCGTCGAAGATGACGCCCCCCTGGGCCGAGGCATGCGGGCCGCGCTGGAAGACGCCGGCCATGCAGTCGATTGGGCCAGGACCGGCGAAGAGGCATTGCTGGCGTGCCGCAGCGAAGCCTATGGCGTCATCCTGCTGGACCTCGGCCTTCCCGACATCGCGGGGCTGGCGGTGCTCCGCGAACTTCGGGACAAGAACCGGCTCGTCCCGGTCATCGTCATCACCGCGCAGGACCGGATCACCCAGCGCGTTGCGGGGCTGGATGCCGGTGCCGACGATTATCTGGTCAAGCCGCTGGATATCGACGAGCTGGCCGCGCGCGTGCGCGCGCAGCTGCGGCGGCGCGACGGACGGGGATCCGATCTTCTCGTCGCGCGCGACGTGGCGCTCGATCTCGGAGGCCGCACCGTCCGGCTACGCGACCGGCCGGTCGCGCTGACCGCCAAGGAATTCCGGATAGCCGCGCTCCTCATGCGCCGGGCCGGCCGCTTCGTCAGCAAGGCGGAACTCGAAGCGGCGCTGTACGACCAGGATCAGTATATCGAGAGCAATACGGTGGAGGTGGCCATCTCGGCGCTGCGGCGCAAGCTGGACAAGGACTTCATCGTCACCGCGCGCGGGCTCGGCTACATGGTCGCGAAATGA
PROTEIN sequence
Length: 220
MARLLLVEDDAPLGRGMRAALEDAGHAVDWARTGEEALLACRSEAYGVILLDLGLPDIAGLAVLRELRDKNRLVPVIVITAQDRITQRVAGLDAGADDYLVKPLDIDELAARVRAQLRRRDGRGSDLLVARDVALDLGGRTVRLRDRPVALTAKEFRIAALLMRRAGRFVSKAELEAALYDQDQYIESNTVEVAISALRRKLDKDFIVTARGLGYMVAK*