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SCNpilot_expt_500_bf_scaffold_2502_14

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(17115..19493)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USH7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 687.0
  • Bit_score: 745
  • Evalue 4.20e-212
TonB-denpendent receptor {ECO:0000313|EMBL:EYR69965.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 804.0
  • Bit_score: 802
  • Evalue 7.00e-229
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 779.0
  • Bit_score: 711
  • Evalue 3.60e-202

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2379
ATGGCACGTCGCTTCGGGCTGCGCGTGAGAATCGCGGCACTTGCCGGCTGCGCTTCACTATGGATTTCGATGCCGGCGGCGGCGCAGGGCAATCCCAGGACAAGCTTCGACATTCCCGCGCAGGATCTGGGCGCGGCCCTGAACCGGGCGGCGATCCAGAGCCACCGCGAGATCGAATTCAATGCGGACCTCGTCCGGTCGCGCAGGGCGCCTGCGGTGCGGGGAAGCTATTCCATCACCGAGGTGCTCGAGCGGCTGTTGACCGGATCCGGCCTGCGCGCCCGCACGACATCTTCGGGAGCGATCATCATCGAGCCCGTGCAGCAATCCAGCATCGGCATCGGCATCGACGGTAGCGGCGGCGCGCAGGAGCAGCCGGCCGAAGCGGACATCATCGTGACCGCGCAGAAAGTGCGCGAGAAGATGCAGGACGTCCCGATCGCCATTTCGGTCTTCACGGCCAAATCCCTGGACGACCAGAAGATCGAAGGCGGATCGGAGCTGCTGCGCGGAACGCCGAATGTCAGCTTCTCCAAGACCAATTTCGCCAGCTACAACTTCCAGATCCGCGGGATCGGTACGCAGGCGCTGTCGGTGACGACCGATCCGGCGGTCGCAATCAGCTTCAACGCGATGCCGCTCATTCGCAATCGCCTGTTCGAGCAGGAGTATTTCGACGTCGAACGGGTCGAGGTGCTGCGCGGCCCCCAGGGTACGCTATATGGCCGCAACGCCACTGCCGGCGTGGTCAACATGATTCCGATCCTCGCGGATCCCGGCCGGATGGCGGGATCGCTCAAGCTCGAGACGGGCAATTATTCGGCGATGCGGGCAAGCGGAATGCTCAATCTGCCCCTGACCGATGCCTTGGCGGTGCGCGTGGCGGGGGCGTGGACCTCTCGCGATGGCTATGACTACAACATGGTGACGCAGCGCCGCGTCAACGGCCGAGATTTGTGGGGCGCCCGCGGATCGATCCTGTGGAGGCCGTCCCCTCGCTTCACCGCCAGCCTGGTCTGGGAGCATTTCCACGAGGACGATGACCGATCCCGGACCGGGAAACAGCTTTGCCACAGCGATCCCAGCCCCACCAATCTGGACGGGATCTCGATCTATCCGCAGAACCGCGGATATTTCAGCCAGGGTTGCAAGCCAGGCTCGCTCTATGACGACGCCGCGTTCGGGGTGCCCAATGGAGCCAGCCTGCCCAATGTGGCGGCGGCGAGCTCGAGCGTGTCCGGAGCGCTGGGATTTCAGGGCAATACGGGTACCGGGGTCTTCGCCATTCCATTCGCCACCGATCCCTTTGCCGGCGTGGTGCAGTCGCGTGACCTGCGCGTGATCGGCACAACCTATGATCCGGTGTTCCGCGCGAAGAACGACGTCGCGCAATTCAATCTCGAATTCAAGTTGAACGACGGATTGCGGTTCGTGTCACAGGCGGGATGGTCGCGCGACGAATATTATTCGACTCAGGATTACAGCCGGTTTCCCTCGCAGCCGATCTTCACCAATACGGACCCGTCGAACGGCATTACCTATGCCGATACCAACAACGTGCGGGTGCCCGCATATGATCTTCTGCCAGGCGGGGTCTGGTGCGACCCGCAGCTTGGATGCTCGAAAGGGTATCTGGCCGTCGATCTCAATCGATCCAAAAGCAGCCAATGGTCTCAGGAATTTCGCCTGCAATCCTCATTCGACGGCCCGATAAATTTCAACCTTGGAGCCAATTATCTGGATTTCAATATCGATGAAGATTATTATGTATTCAACAATACGTTCTCGCTAGTCGGGACGATATTGTTCAACAAATCCGGCACGGCCGGGTCCAGGCCGGTGGATTCATGTCCGCAGAACGTGACCACGCTTCCATATGTCGGTGCTGGTTACTCGTGCATGTATATCGATCCCAACCCCATCGGAAGCATCGACGGAAATGGGCATAATTATTTCCGAAGCCGCAATGTCGCGCATACGCAGTCCTGGGCCGGGTTCGGAGAACTCTATTGGAAGGCGGCCGATCGCCTGAAGATCACCGCCGGGCTGCGCTATACCCGCGACATCAAGACTACCACGCCCTATGCCACGCAATTGCTGCTGACGCCCGGGCCCCTGGGCGGAGGCTATGTCAACAGCGGCTATCCGGCCTCTCCCGATATCAGGCAGAAATGGGGAGCGGTCACCGGGCGCTTCGTGGTCGATTGGAAGCCGCGTCTATCGTTCACCGACGACACCCTGCTCTATGCTTCCTATGCGAGAGGGTACAAGGCCGGCGGCACCAANNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCGGCCGGAATATATCAACGCGTTCGAAATCGGCACGAAGAACAACCTTGCCGGCGGCAGGCTGA
PROTEIN sequence
Length: 793
MARRFGLRVRIAALAGCASLWISMPAAAQGNPRTSFDIPAQDLGAALNRAAIQSHREIEFNADLVRSRRAPAVRGSYSITEVLERLLTGSGLRARTTSSGAIIIEPVQQSSIGIGIDGSGGAQEQPAEADIIVTAQKVREKMQDVPIAISVFTAKSLDDQKIEGGSELLRGTPNVSFSKTNFASYNFQIRGIGTQALSVTTDPAVAISFNAMPLIRNRLFEQEYFDVERVEVLRGPQGTLYGRNATAGVVNMIPILADPGRMAGSLKLETGNYSAMRASGMLNLPLTDALAVRVAGAWTSRDGYDYNMVTQRRVNGRDLWGARGSILWRPSPRFTASLVWEHFHEDDDRSRTGKQLCHSDPSPTNLDGISIYPQNRGYFSQGCKPGSLYDDAAFGVPNGASLPNVAAASSSVSGALGFQGNTGTGVFAIPFATDPFAGVVQSRDLRVIGTTYDPVFRAKNDVAQFNLEFKLNDGLRFVSQAGWSRDEYYSTQDYSRFPSQPIFTNTDPSNGITYADTNNVRVPAYDLLPGGVWCDPQLGCSKGYLAVDLNRSKSSQWSQEFRLQSSFDGPINFNLGANYLDFNIDEDYYVFNNTFSLVGTILFNKSGTAGSRPVDSCPQNVTTLPYVGAGYSCMYIDPNPIGSIDGNGHNYFRSRNVAHTQSWAGFGELYWKAADRLKITAGLRYTRDIKTTTPYATQLLLTPGPLGGGYVNSGYPASPDIRQKWGAVTGRFVVDWKPRLSFTDDTLLYASYARGYKAGGTXXXXXXXXXXSGRNISTRSKSARRTTLPAAG*