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SCNpilot_expt_500_bf_scaffold_2502_15

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(19614..20405)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein, partial n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI000367979A similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 254.0
  • Bit_score: 145
  • Evalue 6.40e-32
FecR family protein {ECO:0000313|EMBL:EZP49999.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.6
  • Coverage: 230.0
  • Bit_score: 149
  • Evalue 4.80e-33
anti-FecI sigma factor FecR; K07165 transmembrane sensor similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 226.0
  • Bit_score: 137
  • Evalue 7.20e-30

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGATGGCGGCGGTGGCCGGATTGCTGGTCGTCGTCCTGACGTCGATACTCGTCTTCCGCGAAGTCTATCCGGGGCCGGTGCATCGCAACGGCATTGCCGCCGCCGGCCCGGCGCGCGCGCTCTATCGAACCACTATCGGCGGCCGCGCCGAAGTGACTCTGCCCGATGGTTCGGTGGCGGTGCTGGATACGGACAGCGCGATGCGCATCGCCTATACCGACAAGGAGCGGGGAATACGGCTGCTGAAGGGCCAGGCCCTGTTCGTCGTCGCCAAGCATCAGCCGGCACCGTTCCAGGTCTATGCCGGCAGCCAGCGGGTGACGGCGGTGGGCACGCGGTTCAACGTTCGGGTGGAAGGCCATGGTCGCTCCCCGAAGACAAGCGTCGCGCTCATCGAAGGCGTGGTGCGCGTCGCGGGGCTCGACTCCGCCGGGTCGGCCATGCCGGATCGCCGGACGGGCGAAATCACCATGCGCGCCGGCGAACTCTTCGATTCCGCCAGGCCCGGTGCGCTGCGGCTATCCGCGTCCGAAGCGGAGGGCGCGGCGAGTTGGGTGTCGGGAACCTTGTCGTTCAACGATATGCCGCTCGGACGGGCGGTTGCCGAAATGAACCGCTATACCGCGCGCCCCATCGGCCTGGGCGGCGGGGACATCGCGAACCTCAGGGTCAGCGGTGTCTTCAAGACCGGCGACTCCCAGCATTTCGCAGAGTCGATGGCGGAAGTCTTTCATTTGCGCGTGGCGCATGATGCGCGCGGCAATCCGCTCCTCCTGCCCGGGCCGGAATGA
PROTEIN sequence
Length: 264
MMAAVAGLLVVVLTSILVFREVYPGPVHRNGIAAAGPARALYRTTIGGRAEVTLPDGSVAVLDTDSAMRIAYTDKERGIRLLKGQALFVVAKHQPAPFQVYAGSQRVTAVGTRFNVRVEGHGRSPKTSVALIEGVVRVAGLDSAGSAMPDRRTGEITMRAGELFDSARPGALRLSASEAEGAASWVSGTLSFNDMPLGRAVAEMNRYTARPIGLGGGDIANLRVSGVFKTGDSQHFAESMAEVFHLRVAHDARGNPLLLPGPE*