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SCNpilot_expt_500_bf_scaffold_2502_25

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 30274..30594

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037C5F46 similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 106.0
  • Bit_score: 189
  • Evalue 2.10e-45
Membrane protein {ECO:0000313|EMBL:EQB19772.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 106.0
  • Bit_score: 186
  • Evalue 1.40e-44
small multidrug resistance protein; K11741 quaternary ammonium compound-resistance protein SugE similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 105.0
  • Bit_score: 155
  • Evalue 1.40e-35

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Taxonomy

Novosphingobium lindaniclasticum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGGCGTGGCTCGTGCTCGGCATTGCCGTGATCACCGAAATCATCTGGGCGCTCAGCCTCAAATGGGCGGCCATGCAGGGCAACTGGATGGCGTCGGCGGTGCCGATAACGCTCAGCTTCGTGAACATGGGCCTGCTCGCGCTCGCGATGCGCGGCCTGCCGGCGGGCACTGCCTATGCCGTGTGGACGGGCCTGGGCGCGGTGGGCGTCACGATCTTCGGCATCCTGCTGTTCGGCGAGAAGCTCAACCCGGTGCAGATGGGCTTTATCGGCCTGATCATCGTCGGCGTGGTGGGGACCAAGCTGTTCGCCAGCGCATGA
PROTEIN sequence
Length: 107
MAWLVLGIAVITEIIWALSLKWAAMQGNWMASAVPITLSFVNMGLLALAMRGLPAGTAYAVWTGLGAVGVTIFGILLFGEKLNPVQMGFIGLIIVGVVGTKLFASA*