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SCNpilot_expt_500_bf_scaffold_2134_23

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(19650..20357)

Top 3 Functional Annotations

Value Algorithm Source
flagellar hook capping protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC91D similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 236.0
  • Bit_score: 263
  • Evalue 2.50e-67
Flagellar hook capping protein {ECO:0000313|EMBL:AJP73521.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 235.0
  • Bit_score: 304
  • Evalue 1.40e-79
flgD; flagellar basal-body rod modification protein FlgD; K02389 flagellar basal-body rod modification protein FlgD similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 223.0
  • Bit_score: 151
  • Evalue 4.30e-34

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGAGTGATTTCGACAACACCCTCGCCGGGCTGGGCATCTCCCGGTACAACAAGACCAGCACGACGAGCGGCACCACGCTCGACACGAAGGACACGTCGCGGCTCGGCAAGACCGACATGAACGTCTCCGACTTCCTGGCGCTGATGACCGCCCAGCTGAAGAACCAGGACCCGTTCCAGCCGGTCGACAACACCCAGATGGTCGCCCAGATGGCGCAGTTCTCGTCGCTCTCGGGCATCACCGAGATGAGCACCACGCTGAAGTCGATCGCCGGCAAGCTGGGCGCCACCTCGCTCAACGACGCCATCGGCTATGTCGGCAAGAACGTGCTGGTCCAGGGCTCGACCGCCTATCCGCGCACCTCCGGCGGTCTCGCCGGGGCCGTAGCGCTGGACAAGGACGCGACCAACGTCACGGTGACCATCAAGGACACCAACGGCAACACGCTCAAGACGATCGAGATGGGCAAGGAAGCCAAGGGGGCCGTCGCCTGGGACTGGGACGGCAAGACCGATACCGGCGAGGATGCCGGCAAGGGCCCGTTCAACGTCAGCGTCACCGCCACCGACGGCAAGGGCAGCGTCAAGGCCTATCCGCTGGTCTGGGCACCGGTCACCGCCGTCTCGATGGGATCCGACGGCAAGCCCGTCCTCACTCTTCCGGGCATCGGCAACGTGTCCACCGACGCCGTCTGGCAGGTCGGCTGA
PROTEIN sequence
Length: 236
MSDFDNTLAGLGISRYNKTSTTSGTTLDTKDTSRLGKTDMNVSDFLALMTAQLKNQDPFQPVDNTQMVAQMAQFSSLSGITEMSTTLKSIAGKLGATSLNDAIGYVGKNVLVQGSTAYPRTSGGLAGAVALDKDATNVTVTIKDTNGNTLKTIEMGKEAKGAVAWDWDGKTDTGEDAGKGPFNVSVTATDGKGSVKAYPLVWAPVTAVSMGSDGKPVLTLPGIGNVSTDAVWQVG*