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SCNpilot_expt_500_bf_scaffold_2134_24

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(20360..20770)

Top 3 Functional Annotations

Value Algorithm Source
flagellar basal body rod protein FlgC n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC91C similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 136.0
  • Bit_score: 225
  • Evalue 3.30e-56
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 136.0
  • Bit_score: 245
  • Evalue 3.30e-62
flagellar basal-body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 131.0
  • Bit_score: 176
  • Evalue 7.30e-42

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 411
ATGGGCGACCAGCCGCTTTCGATCTTCCAGGTATCCGGCCGCGCGATGAGCGCGCAGCTGGTGCGGATGAACACCACGGCGTCGAACCTGGCCAATGTCGGCACGGTCGCGTCGAGCGCCGACGCCGCCTATCGCACGATCAAGCCGGTGTTCCGCACCGCCTTCGACGAGGCGAGCGGCATGTCGACCGTCGATGTCGAGCAGGTCGTCACCGCGGGCTCCGACCCCACCAAGCGCTACGATCCCGGCAACCCGATGGCCGACAAGGACGGCAATGTCTGGGAAGCCGCCGTGGACGAGACCCGGGAGCTGGTCGACATGATGGAGACCGCCCGGAACTACCAGAACAACGTCGAAGTGATGCAGACTGCCAAGCAGCTCATCGTCGACACCCTCAAGCTGGGCCGCTGA
PROTEIN sequence
Length: 137
MGDQPLSIFQVSGRAMSAQLVRMNTTASNLANVGTVASSADAAYRTIKPVFRTAFDEASGMSTVDVEQVVTAGSDPTKRYDPGNPMADKDGNVWEAAVDETRELVDMMETARNYQNNVEVMQTAKQLIVDTLKLGR*