ggKbase home page

SCNpilot_expt_500_bf_scaffold_4187_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(3..593)

Top 3 Functional Annotations

Value Algorithm Source
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 188.0
  • Bit_score: 341
  • Evalue 6.40e-91
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 185.0
  • Bit_score: 293
  • Evalue 5.90e-77
cysteinyl-tRNA synthetase n=1 Tax=Sphingomonas elodea RepID=UPI0002630684 similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 188.0
  • Bit_score: 341
  • Evalue 6.00e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGGCGACGAGCCGCTATGCCGCCGCTATGACCGGCGCTCAACTCACGCTCTACAATTCGCTGACCCGCGGGCTGGAAACCTTCCAGCCGCTCGATCCCGAGCGCGGCGTGCGCGTCTATTCCTGCGGGCCGACGGTCTACAACTACGCCCATCTCGGCAATCTGCGCGCCTATGTGTTCACCGATACGCTGAGCCGCGTGCTGACCTGGAAGGGATATGCCCTCACCCATGTGATCAACATCACCGATGTCGGCCATCTGACGTCCGATGCCGATGTCGGCGACGACAAGATGGAGGCGGCGGCCCGTGCCCAGGCGAAGAGCATCTGGGACATCGCGGCCCACTATACGGCGGCGTTCAAGCAGAACATCGCCGACCTCAACATCCGCCAGCCCTCGCGCTGGTCGGTCGCGACCGACCACATCGCCGAGATGATCGACTTCGCCGAGAAGATCGCGCCCGAGCATTGCTACGCGCTCGATTCGGGCCTGTATTTCGACGTGACCACCGTGCCCGATTATGGCCGCCTGGCCGGCAATCAGGACGACGCCGCCGAGGGGCGGATCGATCCGGTGGCCGGCAAGCGTCAC
PROTEIN sequence
Length: 197
MATSRYAAAMTGAQLTLYNSLTRGLETFQPLDPERGVRVYSCGPTVYNYAHLGNLRAYVFTDTLSRVLTWKGYALTHVINITDVGHLTSDADVGDDKMEAAARAQAKSIWDIAAHYTAAFKQNIADLNIRQPSRWSVATDHIAEMIDFAEKIAPEHCYALDSGLYFDVTTVPDYGRLAGNQDDAAEGRIDPVAGKRH