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SCNpilot_expt_500_bf_scaffold_3910_8

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(5130..5555)

Top 3 Functional Annotations

Value Algorithm Source
transporter n=1 Tax=Sphingomonas elodea RepID=UPI000263218B similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 141.0
  • Bit_score: 243
  • Evalue 1.60e-61
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 137.0
  • Bit_score: 231
  • Evalue 6.70e-58
comL; putative lipoprotein; K05807 putative lipoprotein similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 129.0
  • Bit_score: 209
  • Evalue 6.20e-52

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 426
GTGCAGCGCGACCAGAAGATCACTCAGCAGGCACTCGATTCGCTGGGCGAGCTGACCCGCCGCTATCCGAACACCAAATATGCCGCCGATGCGCGCCTGAAGATCGACCTCGTCCGCGACCACCTGGCGGGCAAGGAGATGGAGATCGGCCGCTTCTACGAGACGCGTGGCCAGTGGCTCTCGGCGACGCTGCGCTTCCGCACCGTGGTCGACCAGTATCAGATGACCACGCACGTGCCCGAGGCACTGATGCGCCTCACCGAATCCTATCTCGCGCTCGGCGTGCCGGAAGAGGCGGAGAAGGCGGCGGCCGTGCTCGGTGCCAACTATCCGGGCACCGACTGGTACAACCATGCCTATAAGCTGATGCAGGAGAACCAGGGCAAGCTGAAGCAGGCCCAGGTGGTAGCCAAGCCCGCGAGCTGA
PROTEIN sequence
Length: 142
VQRDQKITQQALDSLGELTRRYPNTKYAADARLKIDLVRDHLAGKEMEIGRFYETRGQWLSATLRFRTVVDQYQMTTHVPEALMRLTESYLALGVPEEAEKAAAVLGANYPGTDWYNHAYKLMQENQGKLKQAQVVAKPAS*