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SCNpilot_expt_500_bf_scaffold_5519_7

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(4856..5317)

Top 3 Functional Annotations

Value Algorithm Source
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; EC=1.6.99.5 {ECO:0000313|EMBL:AJP71868.1};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 153.0
  • Bit_score: 278
  • Evalue 6.80e-72
respiratory-chain NADH dehydrogenase subunit 1; K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 148.0
  • Bit_score: 270
  • Evalue 3.20e-70
NADH:ubiquinone oxidoreductase subunit H n=1 Tax=Sphingomonas elodea RepID=UPI0002631A74 similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 153.0
  • Bit_score: 289
  • Evalue 2.80e-75

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
TGGGTCAACGGCTATTTCGCCAATCCGCTGCTGTTCCCGATGGCGGTGGTGTTCTTCATCTCGTCGCTGGCCGAGACGCAGCGCGCGCCGTTCGACCTGACCGAGGCCGAGAGCGAGCTCGTCGCGGGCTATCAGACCGAATATTCGTCGATGGCCTTCGCGCTCTACTGGCTGGGCGAATATGCCAACGTCATCCTGATGTGCGCGCTCAATGCGACGCTGTTCTGGGGCGGCTACCTGCCGCCGCTGGACATTCCGGTGCTCTATTACGTGCCGGGCATCATCTGGCTGCTCGCCAAGATGTGCTTCTTCTTCTTCTGCTTCAGCTGGGTGAAGGCCACGGTGCCCAGGTATCGCTACGACCAGCTGATGCGCCTGGGCTGGAAGATCTTCCTGCCGCTGTCGCTTCTCTTCGTGTTCCTGGTCTCCGGGTATCTGATGCTGATGCGAGTGGGACTCTGA
PROTEIN sequence
Length: 154
WVNGYFANPLLFPMAVVFFISSLAETQRAPFDLTEAESELVAGYQTEYSSMAFALYWLGEYANVILMCALNATLFWGGYLPPLDIPVLYYVPGIIWLLAKMCFFFFCFSWVKATVPRYRYDQLMRLGWKIFLPLSLLFVFLVSGYLMLMRVGL*