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SCNpilot_expt_500_bf_scaffold_10163_3

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(3958..5187)

Top 3 Functional Annotations

Value Algorithm Source
Putative TetR family transcriptional regulator n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C1D7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 395.0
  • Bit_score: 356
  • Evalue 2.90e-95
  • rbh
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:EIZ77587.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 395.0
  • Bit_score: 356
  • Evalue 4.00e-95
putative TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 400.0
  • Bit_score: 301
  • Evalue 4.50e-79
  • rbh

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Taxonomy

Novosphingobium sp. Rr 2-17 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1230
ATGTCCGGTCAAGGTATCGCAGCTGCCGGCAAGGGCAGCGGGAGTGCCGAAAAATGGATTGCGGCGGTGCTAAGTGCCTGGGAAGTGAGCGGCCAGGCCGCGGTCTCGGCGCGCGGGCTCGCGCAGGCGACCGGGCTGCCGGCGTCGTCCATTTATCACCATTTTGGTGACCTTGAACGTTTGTATGTATGCGCGCACGAACATGCCCAGGCACTGGCGGCGGAATGGTGCGGGGCGCGGCTGGATCAGCTTGCGGACGTGCCCGGGGGCGCCGAGTCGCTGCCGGCCTTGCTCGCCGCACTGATCGACGATTGGTGCGAGGGGCAGCGCGGCCTGGCCTTTGCCTGGCGCGAATGCCAGCTGCTGGTCGCGCGCGATCCGCGCTATGGGCCGGCCGCCCAGCGCTGGCGCACGCTTTGGGCGGGATTCTGGCGCCATGTCTGCGACCGGCTCGGCATCCCCGGCACCGCGACGATCACCGAACGGCTGTTCGACGGGGAGAGCTTCCTGCACATGATGCGCTGGCGCCGCTCGGTGGATCGCGCCGCGCTGGACGAACTGTGCCGCGGCTGGGGCAATTGGCTGGGCGGCACCCTGGCCGGGCCGTCGCCCTGGCGCGACATGGCGCGCGGCTGCGCCCAGCGTTCCGCGCCGCTGCCCGAGGCGCGCGACGAGACTGCGGAACGGATAGCCGAAGCGGCGGCGGCGATCGTCGCGCTGGGCGGGGTGGCCGGCGTGACGCACCGCGCGGTGGCGGCCGGGGCCGGGCTGACGCTCGGCGTGGTCTCGCACAAGTTCCGGACGAGCGCCGAGTTGCTCGGATCGGCCTTTGAAGTGATCTATCGCCACAACGTGCCGGCCGGCGAACTCGAGGCGGAACTCGCCGCGGCGACCGATGGCGACGGCCGGGCCATGCTCGACAGGCTCGGCGAGCGGCCGGGGGCGGAGGCGTTCCGCCTCGCCACTTCCGAACTGATGATGGCGGCGATGCGCGATCCGGCGCTTGCGCCCTTCGCTGCGCAACTGCGCTATCTGCGCGGGCGCACCTCGCGGCTGTTCCTGCAGGCGATGATCGGTCGCGACCGGCCGGTCGGCGCGCTCGACGCGGCGATCTTCTCGAGCTTCGCGATCGGACAGGGCAATGCGCACCGGGGCCTGCCCGACGACGAGCGCCAGGCGGCGAGCCTAGCCGAGACCGAGGCGCTGCTCTCCTTCCTGCGCGGCGGCTGA
PROTEIN sequence
Length: 410
MSGQGIAAAGKGSGSAEKWIAAVLSAWEVSGQAAVSARGLAQATGLPASSIYHHFGDLERLYVCAHEHAQALAAEWCGARLDQLADVPGGAESLPALLAALIDDWCEGQRGLAFAWRECQLLVARDPRYGPAAQRWRTLWAGFWRHVCDRLGIPGTATITERLFDGESFLHMMRWRRSVDRAALDELCRGWGNWLGGTLAGPSPWRDMARGCAQRSAPLPEARDETAERIAEAAAAIVALGGVAGVTHRAVAAGAGLTLGVVSHKFRTSAELLGSAFEVIYRHNVPAGELEAELAAATDGDGRAMLDRLGERPGAEAFRLATSELMMAAMRDPALAPFAAQLRYLRGRTSRLFLQAMIGRDRPVGALDAAIFSSFAIGQGNAHRGLPDDERQAASLAETEALLSFLRGG*