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SCNpilot_expt_500_bf_scaffold_17650_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 1175..1498

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631ABC similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 107.0
  • Bit_score: 180
  • Evalue 9.70e-43
Nucleoid-associated protein TS85_09580 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 107.0
  • Bit_score: 184
  • Evalue 9.40e-44
hypothetical protein; K09747 hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 107.0
  • Bit_score: 155
  • Evalue 1.00e-35

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGAAGAGTCTCGAAGACATCATGGCCATGGCGCAGAACGTCCAGGCCGAACTTACCAAGGCGCAGGCCGATCTCGACAAGATCGAGGTGGAAGGCGCGTCGGGCGGCGGGCTGGTCAAGGTCCAGGCTTCCGCCAAGGGCCGGATCATCGGCATCCAGATCGACGATTCACTGCTGAACCCGGCGGAGAAGGGCATGCTCGAGGATCTGCTCGCGGCAGCCTTCAACGACGCCCGCGCCAAGGCCGACGCCGCCTCGCAGGAGGCGATGTCGAAAATGACGAGCGGCTTGCCGCTGCCGCCGGGCTTCAAGCTGCCCTTCTGA
PROTEIN sequence
Length: 108
MKSLEDIMAMAQNVQAELTKAQADLDKIEVEGASGGGLVKVQASAKGRIIGIQIDDSLLNPAEKGMLEDLLAAAFNDARAKADAASQEAMSKMTSGLPLPPGFKLPF*